HHsearch alignment for GI: 255764514 and conserved domain: PRK13549
>PRK13549 xylose transporter ATP-binding subunit; Provisional.
Probab=98.14 E-value=0.00013 Score=49.44 Aligned_cols=100 Identities=19% Similarity=0.230 Sum_probs=73.6
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEECHHHH-HHHCCCEEEEEEE
Q ss_conf 062157999999999843668997699803446888799999999999973059-39998083798-6501761799996
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKI-QLLAVTHAPQV-AARADRHFLVYKT 505 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~-Qvi~ITH~pqv-Aa~a~~h~~v~K~ 505 (554)
T Consensus 406 LSGGq~QRv~iAraL~----~~P~iLilDEPT~GLD~~~~~~i~~ll~~l~~~G~tvl~iSHDl~~v~~~aDRV~Vm~~- 480 (513)
T PRK13549 406 LSGGNQQKAILAKCLL----LNPRILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHE- 480 (513)
T ss_pred CCHHHHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEEC-
T ss_conf 9999999999999997----19989999798668999999999999999995799999991868999986999999989-
Q ss_pred ECCCCCCEEEEEEEECCHHHH--HHHHHHHHCCCCCHH
Q ss_conf 216875258999997598899--999999866880028
Q gi|255764514|r 506 NKPDDTQRIETYVAVLTPQER--REEIARMLAGSHITE 541 (554)
Q Consensus 506 ~~~~~~~~~~~~i~~l~~~~r--~~Eiarml~g~~~~~ 541 (554)
T Consensus 481 ---G---~---I~~~~~~~~~~~e~~~~~~~~~~~~~~ 509 (513)
T PRK13549 481 ---G---K---LKGDLINHNLTQEQVMEAALRSEHHVE 509 (513)
T ss_pred ---C---E---EEEEECHHHCCHHHHHHHHHCCCCCHH
T ss_conf ---9---9---998847475899999999857985233