HHsearch alignment for GI: 255764514 and conserved domain: PTZ00265
>PTZ00265 multidrug resistance protein (mdr1); Provisional.
Probab=97.88 E-value=0.0001 Score=50.00 Aligned_cols=74 Identities=19% Similarity=0.307 Sum_probs=61.6
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEECHHHHHHHCCCEEEEEE
Q ss_conf 40621579999999998436689976998034468887999999999999730--5939998083798650176179999
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSK--KIQLLAVTHAPQVAARADRHFLVYK 504 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~--~~Qvi~ITH~pqvAa~a~~h~~v~K 504 (554)
T Consensus 1359 nLSgGQKQrIaIARA--LL--R~pkILLLDEATSaLD~eSE~~VQ~aL~~~~~~~~rTvI~IAHRLsTI~~aD~I~Vld~ 1434 (1467)
T PTZ00265 1359 SLSGGQKQRIAIARA--LL--REPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNN 1434 (1467)
T ss_pred CCCHHHHHHHHHHHH--HH--HCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCEEEEEEC
T ss_conf 369999999999999--97--64998999680205898999999999999885289989985642778996898999947