HHsearch alignment for GI: 255764514 and conserved domain: TIGR03007
>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; InterPro: IPR014345 Members of this entry belong to the family of polysaccharide chain length determinant proteins. They are found in species that encode the PEP-CTERM/exosortase system and are predicted to act in protein sorting in a number of Gram-negative bacteria, they are also found near the epsH homologue that is the putative exosortase gene..
Probab=97.52 E-value=0.0084 Score=37.42 Aligned_cols=260 Identities=18% Similarity=0.205 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHH---HHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHCCCCCCCCCH--
Q ss_conf 89999999999999988877665555-43--344---44332110000023443346-77788898620001232102--
Q gi|255764514|r 155 LCELGTLYRHWCCTADALKKYQEQKS-SS--QDV---EFLRFSIDELQALAVQPGEE-NELVVMRSKILKQERIAVEL-- 225 (554)
Q Consensus 155 ~~~~~~~~~~~~~~~~~l~~l~~~~~-~~--~e~---e~l~~ql~El~~~~l~~~E~-e~L~~~~~~l~~~e~l~~~l-- 225 (554)
T Consensus 167 ~~Qik~Y~~kL~~aE~~L~~FK~~~~~~lp~~~~~y~~~l~~~~~~L~~~~l~~~e~~~~Rd~l~rQL~g~~Pv~~~~~g 246 (510)
T TIGR03007 167 DEQIKEYEKKLEAAENRLKAFKQENGGILPDQEGDYYSELSEAQEELEAARLELNEAKAQRDALKRQLAGEEPVLLAGSG 246 (510)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
T ss_conf 99999999999999999998768734537797378999999999999999999998887678875145886615623688
Q ss_pred --HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH----------HHHCCCH-
Q ss_conf --345553200100179999999865431001100136676422210010799999998753----------0001487-
Q gi|255764514|r 226 --SSIMDDFHKSSSPISVISSMLRRLERKSTEVPDLLQKSISFLNEAQENLSDAQHEIERSF----------SEIQYDA- 292 (554)
Q Consensus 226 --~~~~~~l~~~~~~l~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~e~~~el~~~~----------~~le~~~- 292 (554)
T Consensus 247 ~~~~~s~~~~~~~~Ri~~L~~~Ld~L~l~YTd~HPdv~~~k~~Ia~L~~~~~~---e~~~~~~Q~~~~~~~~~~~~~nPv 323 (510)
T TIGR03007 247 EKSASSVANSELDSRIEALEKQLDALRLRYTDKHPDVIATKREIAQLEEQKEE---ELESYRKQNGEGGGSEKGSIYNPV 323 (510)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 86653123562568999999999986336301155899999999999999889---998898730345555566789831
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----640123566678888787620111568887520000266644334577777888887676521113667899999
Q gi|255764514|r 293 -----QELANIEERLFALRAMSRKYSVSIDQLPELAKKMEEDLADISEGNEKVVSLERVLYEARQAYDRVAQDISTKRYQ 367 (554)
Q Consensus 293 -----~~L~~ie~Rl~~l~~L~rK~~~~~eel~~~~~~l~~~l~~l~~~~~~l~~l~~~~~~~~~~l~~~a~~Ls~~R~~ 367 (554)
T Consensus 324 yQql~~~l~~~eA~~asl~~r-------~~~~~~~~~~l~~~~~~iP~veaEl~~L~rdy~~~k~~Ye~L-----l~R~e 391 (510)
T TIGR03007 324 YQQLQIELAEAEAEIASLEAR-------VAELTARIERLESLLRTIPEVEAELTQLNRDYEVNKSNYEQL-----LARRE 391 (510)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHH
T ss_conf 377899999999999999999-------999999999999997532799999999998875558889999-----98898
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCC
Q ss_conf 99888999997666520256337865202532234465432001101278998311354406215799999999984366
Q gi|255764514|r 368 FAKMLEKNVMAEMPALKLENVCFTVNITSDKEDISPDGIDRVEFYVQTNRGENPGPLMKLASGGELSRFLLALKIVLVDQ 447 (554)
Q Consensus 368 ~a~~L~~~i~~~L~~L~m~~a~f~i~~~~~~~~~~~~G~d~v~f~~s~n~g~~~~pl~kiaSGGE~Sr~~LAl~~~~~~~ 447 (554)
T Consensus 392 ~A-~~S~~~e~~-----~~~v~FRv-iDPP~~P~~PsgP~R~ll~~----------~~--~~~Glg~--G~gl~fl~sql 450 (510)
T TIGR03007 392 SA-EVSKQMEVQ-----DKAVSFRV-IDPPIVPSKPSGPNRPLLLL----------AV--LLGGLGA--GIGLAFLLSQL 450 (510)
T ss_pred HH-HHHHHEEEE-----CCCEEEEE-ECCCCCCCCCCCCCHHHHHH----------HH--HHHHHHH--HHHHHHHHHHC
T ss_conf 55-553303320-----67024677-56756789999878899999----------99--9999999--99999999841
Q ss_pred CCC
Q ss_conf 899
Q gi|255764514|r 448 GSI 450 (554)
Q Consensus 448 ~~~ 450 (554)
T Consensus 451 ~p~ 453 (510)
T TIGR03007 451 RPT 453 (510)
T ss_pred CCC
T ss_conf 787