HHsearch alignment for GI: 255764514 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=98.42 E-value=2.8e-06 Score=60.36 Aligned_cols=74 Identities=26% Similarity=0.321 Sum_probs=65.4
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCEEEEEE
Q ss_conf 406215799999999984366899769980344688879999999999997305939998083798650176179999
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVAARADRHFLVYK 504 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pqvAa~a~~h~~v~K 504 (554)
T Consensus 601 ~LSgGqrQri~lARAl~----~~p~ililDE~ts~LD~~~e~~i~~~l~~~~~~~T~i~itHrls~i~~aD~i~vl~~ 674 (694)
T TIGR03375 601 SLSGGQRQAVALARALL----RDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDN 674 (694)
T ss_pred CCCHHHHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEEC
T ss_conf 46899999999999995----799989997875688999999999999986699989998168999984999999989