HHsearch alignment for GI: 255764514 and conserved domain: TIGR03411
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=98.06 E-value=5e-05 Score=52.09 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=60.0
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH-HCCCEEEEE
Q ss_conf 40621579999999998436689976998034468887999999999999730593999808379865-017617999
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKIQLLAVTHAPQVAA-RADRHFLVY 503 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~Qvi~ITH~pqvAa-~a~~h~~v~ 503 (554)
T Consensus 143 ~LSgGqkqrv~iA~aL~----~~P~lllLDEPt~gLD~~~~~~i~~ll~~l~~~~tvi~isHdl~~~~~~~drv~vl~ 216 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLM----QDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLH 216 (242)
T ss_pred HCCHHHHHHHHHHHHHH----HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEE
T ss_conf 59978999999999997----389989991864369989999999999998579979999785999999799999997