HHsearch alignment for GI: 255764514 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=98.04 E-value=4.8e-05 Score=52.21 Aligned_cols=74 Identities=24% Similarity=0.343 Sum_probs=60.1
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CEEEEECHHH-HHHHCCCEEEEEE
Q ss_conf 4062157999999999843668997699803446888799999999999973059-3999808379-8650176179999
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKKI-QLLAVTHAPQ-VAARADRHFLVYK 504 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~~-Qvi~ITH~pq-vAa~a~~h~~v~K 504 (554)
T Consensus 133 ~LSgG~~qrv~iAraL~----~~P~illlDEPt~GLDp~~~~~i~~~i~~l~~~g~tili~tH~l~~~~~~~drv~vl~~ 208 (232)
T cd03218 133 SLSGGERRRVEIARALA----TNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred HCCHHHHHHHHHHHHHH----CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEEC
T ss_conf 59999999999999996----69999998898568899999999999999995899999992839999986999999979