HHsearch alignment for GI: 255764514 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=97.90 E-value=3.5e-05 Score=53.14 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=34.8
Q ss_pred EEEECCEEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9994227899998873898-18998899978889999999871
Q gi|255764514|r 4 LSIYNIVLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 4 L~i~Nf~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 8 ~~y~~~~vl~~is~~i~~ge~~~l~G~NGsGKTTl~~~l~G~~ 50 (144)
T cd03221 8 KTYGGKLLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGEL 50 (144)
T ss_pred EEECCEEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999996348998799999999899984999999984898