HHsearch alignment for GI: 255764514 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=97.82 E-value=3.1e-05 Score=53.41 Aligned_cols=33 Identities=36% Similarity=0.686 Sum_probs=29.5
Q ss_pred EEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 7899998873898-18998899978889999999
Q gi|255764514|r 10 VLIESLDIDFSAG-LSILSGDTGSGKSILLDALI 42 (554)
Q Consensus 10 ~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~ 42 (554)
T Consensus 15 ~il~~isl~i~~Ge~v~i~G~sGsGKSTLl~~l~ 48 (166)
T cd03223 15 VLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALA 48 (166)
T ss_pred EEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHC
T ss_conf 8894458898899999999589998899999986