HHsearch alignment for GI: 255764514 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=98.26 E-value=9e-06 Score=56.99 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=58.3
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH-HCCCEEEEEC-HHHHHHHCCCEEEE
Q ss_conf 4062157999999999843668997699803446888799999999999973-0593999808-37986501761799
Q gi|255764514|r 427 LASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLS-KKIQLLAVTH-APQVAARADRHFLV 502 (554)
Q Consensus 427 iaSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls-~~~Qvi~ITH-~pqvAa~a~~h~~v 502 (554)
T Consensus 125 ~LSgGqkqRv~lA~al~----~~p~llllDEPt~gLD~~s~~~~~~~l~~~~~~g~~ii~~sH~~~~~~~~~~r~i~l 198 (201)
T cd03231 125 QLSAGQQRRVALARLLL----SGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred HCCHHHHHHHHHHHHHH----CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEC
T ss_conf 47999999999999997----499999980886557999999999999999868999999986714678722969982