HHsearch alignment for GI: 255764514 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=98.34 E-value=5.3e-06 Score=58.53 Aligned_cols=71 Identities=31% Similarity=0.428 Sum_probs=59.3
Q ss_pred HCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEECHHHHH-HHCCCEEEE
Q ss_conf 06215799999999984366899769980344688879999999999997305-9399980837986-501761799
Q gi|255764514|r 428 ASGGELSRFLLALKIVLVDQGSIPTLVFDEVDSGIGGAVADAIGYRLKQLSKK-IQLLAVTHAPQVA-ARADRHFLV 502 (554)
Q Consensus 428 aSGGE~Sr~~LAl~~~~~~~~~~p~~ifDEiDagi~G~~a~~v~~~l~~ls~~-~Qvi~ITH~pqvA-a~a~~h~~v 502 (554)
T Consensus 133 LSgGqkQRv~iAraL~----~~P~lLlLDEPtsgLD~~~~~~~~~~i~~l~~~g~tii~vtHdl~~~~~~~drii~l 205 (213)
T cd03235 133 LSGGQQQRVLLARALV----QDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLL 205 (213)
T ss_pred CCHHHHHHHHHHHHHH----CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEE
T ss_conf 7989999999999996----699999981886678999999999999999968999999907989999979999999