HHsearch alignment for GI: 255764514 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=97.75 E-value=3.9e-05 Score=52.79 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=29.3
Q ss_pred EEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 7899998873898-1899889997888999999987
Q gi|255764514|r 10 VLIESLDIDFSAG-LSILSGDTGSGKSILLDALILV 44 (554)
Q Consensus 10 ~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~ 44 (554)
T Consensus 18 ~~L~~isl~i~~G~~v~ivG~sGsGKSTLl~ll~gl 53 (220)
T cd03245 18 PALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGL 53 (220)
T ss_pred CCEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 515345999879999999999998599999999672