HHsearch alignment for GI: 255764514 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.78 E-value=3.7e-05 Score=52.94 Aligned_cols=33 Identities=24% Similarity=0.590 Sum_probs=28.5
Q ss_pred EEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHH
Q ss_conf 899998873898-189988999788899999998
Q gi|255764514|r 11 LIESLDIDFSAG-LSILSGDTGSGKSILLDALIL 43 (554)
Q Consensus 11 ~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~ 43 (554)
T Consensus 18 vL~~inl~i~~Ge~vaivG~sGsGKSTLl~ll~g 51 (229)
T cd03254 18 VLKDINFSIKPGETVAIVGPTGAGKTTLINLLMR 51 (229)
T ss_pred EEECEEEEECCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf 8746299987999999999999809999999966