HHsearch alignment for GI: 255764514 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.76 E-value=5.7e-05 Score=51.70 Aligned_cols=39 Identities=23% Similarity=0.419 Sum_probs=31.9
Q ss_pred ECCEEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 4227899998873898-18998899978889999999871
Q gi|255764514|r 7 YNIVLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 7 ~Nf~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 11 g~~~al~~vs~~i~~Gei~~iiGpnGaGKSTl~~~i~Gl~ 50 (213)
T cd03259 11 GSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLE 50 (213)
T ss_pred CCEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 9999984617798899899999999973999999997599