HHsearch alignment for GI: 255764514 and conserved domain: cd03266
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=97.71 E-value=5.7e-05 Score=51.70 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=30.6
Q ss_pred EEEEEEEEECCCC-EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 7899998873898-18998899978889999999871
Q gi|255764514|r 10 VLIESLDIDFSAG-LSILSGDTGSGKSILLDALILVT 45 (554)
Q Consensus 10 ~~i~~~~i~f~~G-l~vItGetGaGKS~ildAl~~~l 45 (554)
T Consensus 19 ~al~~vs~~i~~Gei~gllG~NGaGKSTllk~i~Gl~ 55 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLL 55 (218)
T ss_pred EEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 9872627898598299999999984999999997797