HHsearch alignment for GI: 255764515 and conserved domain: COG0514

>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair].
Probab=99.81  E-value=5.3e-17  Score=121.26  Aligned_cols=300  Identities=19%  Similarity=0.235  Sum_probs=171.7

Q ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             874789999999996798099958899868999999999997599949999160-4656999999998558888159998
Q gi|255764515|r    2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPL-RVAQSVWTSEVQRWSNFSHMNISVI   80 (458)
Q Consensus         2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~-~l~~~~W~~Ei~kf~~~~~~~~~~~   80 (458)
T Consensus        17 ~FR~gQ~evI~~~l~g~d~lvvmPTGgGKSlCyQ--iPAll~--~G~TLVVSPLiSLM~DQ-V~~l~~----~Gi~A~~l   87 (590)
T COG0514          17 SFRPGQQEIIDALLSGKDTLVVMPTGGGKSLCYQ--IPALLL--EGLTLVVSPLISLMKDQ-VDQLEA----AGIRAAYL   87 (590)
T ss_pred             CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHH--HHHHHC--CCCEEEECCHHHHHHHH-HHHHHH----CCCEEEHH
T ss_conf             0388889999999658867998538987106743--678865--99789978568889999-999997----59652044


Q ss_pred             EC--CHHHHHHHH----CCCCCEEEECCCCHHH-HHHHCCCCCCCCEEECCCCCCCCCCC---CCCHHHHHHHHHHHHHC
Q ss_conf             58--978988873----0779869980642023-34420001132204404531002465---43115677776654305
Q gi|255764515|r   81 TG--TVKQRTKVL----KTPAVLYVINFENLGW-LVQELKGTWPFATIVVDESTKLKSFR---LRQGSKTARALAKPAWE  150 (458)
Q Consensus        81 ~g--~~~~r~~~~----~~~~~i~i~s~e~~~~-~~~~~~~~~~~~~iIiDEaH~lkn~~---~~~~s~~~~~l~~~~~~  150 (458)
T Consensus        88 nS~l~~~e~~~v~~~l~~g~~klLyisPErl~~~~f~~~L~~~~i~l~vIDEAHCiSqWGhdFRP~Y~~l-g~l~~~~~~  166 (590)
T COG0514          88 NSTLSREERQQVLNQLKSGQLKLLYISPERLMSPRFLELLKRLPISLVAIDEAHCISQWGHDFRPDYRRL-GRLRAGLPN  166 (590)
T ss_pred             HCCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCHHHHHH-HHHHHHCCC
T ss_conf             2436787799999998649645999881363176899999708875699621777764177437768999-999851799


Q ss_pred             CCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98079965840231001013467751788877532778877736956403300002455554558999997424543320
Q gi|255764515|r  151 SERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDCCLSLD  230 (458)
Q Consensus       151 ~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  230 (458)
T Consensus       167 -~p~~AlTATA~~~v~~DI~~~L~l~~~~~~--------~----------------------------------------  197 (590)
T COG0514         167 -PPVLALTATATPRVRDDIREQLGLQDANIF--------R----------------------------------------  197 (590)
T ss_pred             -CCEEEEECCCCHHHHHHHHHHHCCCCCCEE--------E----------------------------------------
T ss_conf             -977997378986789999998467886648--------7----------------------------------------


Q ss_pred             CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf             00010010011000345245368998889999998510334520223478888754203541000223430001343333
Q gi|255764515|r  231 IADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK  310 (458)
Q Consensus       231 ~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~~~~k~~  310 (458)
T Consensus       198 ----~sfdRpNi~~~v~~~~-~~~~q~~----------------------------------------------------  220 (590)
T COG0514         198 ----GSFDRPNLALKVVEKG-EPSDQLA----------------------------------------------------  220 (590)
T ss_pred             ----ECCCCCHHHHHHHHCC-CHHHHHH----------------------------------------------------
T ss_conf             ----1589852345564256-4788899----------------------------------------------------


Q ss_pred             CHHHHHHCCCCCEEEEHHHHHHHHHHHHH----------CCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCC
Q ss_conf             25665412488403422236788866410----------00265334458998764245885589984422111622001
Q gi|255764515|r  311 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY  380 (458)
Q Consensus       311 ~l~~il~~~~~~kviif~~~~~~~~~i~~----------~~~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL~~  380 (458)
T Consensus       221 fi~~-~~~~~~~~GIIYc~sRk~~E~ia~~L~~~g~~a~~YHaGl~~~eR~~~q~~f~~~~~~iiVAT-~AFGMGIdKpd  298 (590)
T COG0514         221 FLAT-VLPQLSKSGIIYCLTRKKVEELAEWLRKNGISAGAYHAGLSNEERERVQQAFLNDEIKVMVAT-NAFGMGIDKPD  298 (590)
T ss_pred             HHHH-HCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE-CCCCCCCCCCC
T ss_conf             9874-132468972899933775999999999779725775189889999999999716998689996-46247767888


Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECC
Q ss_conf             78599990899898686445666620220203787752899998589
Q gi|255764515|r  381 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN  427 (458)
Q Consensus       381 a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v~v~~li~~~  427 (458)
T Consensus       299 -VRfViH~~lP~s~EsYyQE~GRA-----GRDG~~a~--aill~~~~  337 (590)
T COG0514         299 -VRFVIHYDLPGSIESYYQETGRA-----GRDGLPAE--AILLYSPE  337 (590)
T ss_pred             -CEEEEEECCCCCHHHHHHHHHHC-----CCCCCCCE--EEEEECCC
T ss_conf             -40799806998989999997135-----67877021--78860630