HHsearch alignment for GI: 255764515 and conserved domain: COG0653
>COG0653 SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion].
Probab=98.19 E-value=0.00024 Score=44.59 Aligned_cols=143 Identities=18% Similarity=0.283 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHH---HHHHHHHHHHHHCCCCCCEEE
Q ss_conf 87478999999999679809995889986899999999999759994999916046---569999999985588881599
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRV---AQSVWTSEVQRWSNFSHMNIS 78 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l---~~~~W~~Ei~kf~~~~~~~~~ 78 (458)
T Consensus 78 g~r~~dVQliG~i~lh~g~iaEM~TGEGKTL~atlp-~ylnaL~gkgVhvVTvNdYLA~RDae~m~~l~~~LG---LsvG 153 (822)
T COG0653 78 GMRHFDVQLLGGIVLHLGDIAEMRTGEGKTLVATLP-AYLNALAGKGVHVVTVNDYLARRDAEWMGPLYEFLG---LSVG 153 (822)
T ss_pred CCCHHHHHHHHCHHHCCCCEEEEECCCCHHHHHHHH-HHHHHCCCCCCEEEEEHHHHHHHCHHHHHHHHHHCC---CCEE
T ss_conf 897236999612352378144554377359998899-999723899748950048774428999899998768---8232
Q ss_pred EEE--CCHHHHHHHHCCCCCEEEECCCC---H--HHHH------HHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 985--89789888730779869980642---0--2334------420001132204404531002465431156777766
Q gi|255764515|r 79 VIT--GTVKQRTKVLKTPAVLYVINFEN---L--GWLV------QELKGTWPFATIVVDESTKLKSFRLRQGSKTARALA 145 (458)
Q Consensus 79 ~~~--g~~~~r~~~~~~~~~i~i~s~e~---~--~~~~------~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~ 145 (458)
T Consensus 154 ~~~~~m~~~ek~~aY~~D-----ItY~TnnElGFDYLRDNm~~~~ee~vqr~~~faIvDEvDSI---------------- 212 (822)
T COG0653 154 VILAGMSPEEKRAAYACD-----ITYGTNNELGFDYLRDNMVTSQEEKVQRGLNFAIVDEVDSI---------------- 212 (822)
T ss_pred ECCCCCCHHHHHHHHHCC-----CEECCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCHHHE----------------
T ss_conf 235889867868887337-----54305500175522214320587755036883887551440----------------
Q ss_pred HHHHCCCEEEEECCCCHHHHCCCHHHH
Q ss_conf 543059807996584023100101346
Q gi|255764515|r 146 KPAWESERFIELTGTPSPNGLIDLWGQ 172 (458)
Q Consensus 146 ~~~~~~~~~l~LTgTPi~n~~~el~~l 172 (458)
T Consensus 213 -LIDEARtPLiISG-~~~~~-~~~Y~~ 236 (822)
T COG0653 213 -LIDEARTPLIISG-PAEDS-SELYKK 236 (822)
T ss_pred -EEECCCCCEEEEC-CCCCC-CHHHHH
T ss_conf -0000366523216-66567-259999