HHsearch alignment for GI: 255764515 and conserved domain: COG1110

Probab=99.43  E-value=5e-11  Score=85.07  Aligned_cols=125  Identities=20%  Similarity=0.220  Sum_probs=88.9

Q ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC-CEEEE-E
Q ss_conf             747899999999967980999588998689999999999975999499991604656999999998558888-15999-8
Q gi|255764515|r    3 LAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSH-MNISV-I   80 (458)
Q Consensus         3 L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~-~~~~~-~   80 (458)
T Consensus        83 ~ws~QR~WakR~~rg~SFaiiAPTGvGKTTfg~~~sl~~a~kg-kr~yii~PT~~Lv~Q~~~kl~~~~e~~~~~~~~~~y  161 (1187)
T COG1110          83 PWSAQRVWAKRLVRGKSFAIIAPTGVGKTTFGLLMSLYLAKKG-KRVYIIVPTTTLVRQVYERLKKFAEDAGSLDVLVVY  161 (1187)
T ss_pred             CHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             6078899999987378448982788765479999999987558-749999667899999999999988653785246653


Q ss_pred             ECC--HHHHHH----HHCCCCCEEEECCCCHHHHHHHCCCCCCCCEEECCCCCCC
Q ss_conf             589--789888----7307798699806420233442000113220440453100
Q gi|255764515|r   81 TGT--VKQRTK----VLKTPAVLYVINFENLGWLVQELKGTWPFATIVVDESTKL  129 (458)
Q Consensus        81 ~g~--~~~r~~----~~~~~~~i~i~s~e~~~~~~~~~~~~~~~~~iIiDEaH~l  129 (458)
T Consensus       162 h~~l~~~ekee~le~i~~gdfdIlitTs~FL~k~~e~L~~-~kFdfifVDDVDA~  215 (1187)
T COG1110         162 HSALPTKEKEEALERIESGDFDILITTSQFLSKRFEELSK-LKFDFIFVDDVDAI  215 (1187)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC-CCCCEEEECCHHHH
T ss_conf             1236657799999998659963999747878866998404-57778998047889