HHsearch alignment for GI: 255764515 and conserved domain: COG1201
>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=99.93 E-value=7.6e-23 Score=156.62 Aligned_cols=318 Identities=19% Similarity=0.207 Sum_probs=193.3
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-HHHHHHHHHCC--C----CCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 874789999999996798099958899868999-99999999759--9----9499991604656999999998558888
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSV-LTALSYIHLWG--E----KSVLVIAPLRVAQSVWTSEVQRWSNFSH 74 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~a-l~~~~~l~~~~--~----~~~LIv~P~~l~~~~W~~Ei~kf~~~~~ 74 (458)
T Consensus 22 ~~t~~Q~~a~~~i~~G~nvLiiAPTGsGKTeAAfLpil~~l~~~~~~~~~~~i~~lYIsPLkALn~Di~~rL~~~~~~~G 101 (814)
T COG1201 22 SLTPPQRYAIPEIHSGENVLIIAPTGSGKTEAAFLPVINELLSLGKGKLEDGIYALYISPLKALNNDIRRRLEEPLRELG 101 (814)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99878999999985898469986899973799999999999860688888856999957078887899999999999759
Q ss_pred CEEEEEECCH--HHHHHHHCCCCCEEEECCCCHHHHH-----HHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 1599985897--8988873077986998064202334-----42000113220440453100246543115677776654
Q gi|255764515|r 75 MNISVITGTV--KQRTKVLKTPAVLYVINFENLGWLV-----QELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKP 147 (458)
Q Consensus 75 ~~~~~~~g~~--~~r~~~~~~~~~i~i~s~e~~~~~~-----~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~ 147 (458)
T Consensus 102 ~~v~vRhGDT~~~er~r~~~~PPdILiTTPEsL~lll~~~~~r~~l~~v--r~VIVDEiHel~~--sKRG~~Lsl~LeRL 177 (814)
T COG1201 102 IEVAVRHGDTPQSEKQKMLKNPPHILITTPESLAILLNSPKFRELLRDV--RYVIVDEIHALAE--SKRGVQLALSLERL 177 (814)
T ss_pred CCCCEECCCCCHHHHHHCCCCCCCEEEECHHHHHHHHCCHHHHHHHCCC--CEEEEEHHHHHHC--CCCCHHHHHHHHHH
T ss_conf 8444422878867763046999968995834899983688899986078--0999512545434--56531343329999
Q ss_pred HHCC--CEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3059--80799658402310010134677517888775327788777369564033000024555545589999974245
Q gi|255764515|r 148 AWES--ERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDC 225 (458)
Q Consensus 148 ~~~~--~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 225 (458)
T Consensus 178 ~~l~~~~qRIGLSATV~--~~~~---varfL~g~------------------~~-----------------------~~~ 211 (814)
T COG1201 178 RELAGDFQRIGLSATVG--PPEE---VAKFLVGF------------------GD-----------------------PCE 211 (814)
T ss_pred HHHCCCCEEEEEHHCCC--CHHH---HHHHHCCC------------------CC-----------------------CEE
T ss_conf 85175537975402158--8899---99985478------------------98-----------------------429
Q ss_pred HHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCC
Q ss_conf 43320000100100110003452453689988899999985103345202234788887542035410002234300013
Q gi|255764515|r 226 CLSLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH 305 (458)
Q Consensus 226 ~~~~~~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~~ 305 (458)
T Consensus 212 Iv~~~~------~k~~~i~v~~p~~--~~~~~~--------------------------------------------~~~ 239 (814)
T COG1201 212 IVDVSA------AKKLEIKVISPVE--DLIYDE--------------------------------------------ELW 239 (814)
T ss_pred EEECCC------CCCCEEEEEECCC--CCCCCC--------------------------------------------CHH
T ss_conf 997456------7753179980477--500026--------------------------------------------246
Q ss_pred CCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC-----------CCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCC
Q ss_conf 433332566541248840342223678886641000-----------265334458998764245885589984422111
Q gi|255764515|r 306 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 374 (458)
Q Consensus 306 ~~k~~~l~~il~~~~~~kviif~~~~~~~~~i~~~~-----------~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~ 374 (458)
T Consensus 240 ~~~~~~i~~~v~~~~--ttLIF~NTR~~aE~l~~~L~~~~~~~i~~HHgSlSre~R~~vE~~lk~G~lravV~T-SSLEL 316 (814)
T COG1201 240 AALYERIAELVKKHR--TTLIFTNTRSGAERLAFRLKKLGPDIIEVHHGSLSRELRLEVEERLKEGELKAVVAT-SSLEL 316 (814)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC-CCHHH
T ss_conf 789999999996168--589997272789999999987268755653166657789999999866886299980-64220
Q ss_pred CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECCCHHHHH
Q ss_conf 62200178599990899898686445666620220203787752899998589968999
Q gi|255764515|r 375 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 433 (458)
Q Consensus 375 GlnL~~a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v~v~~li~~~tide~i 433 (458)
T Consensus 317 GIDiG-~vdlVIq~~SP~sV~r~lQRiGRsg----Hr~~~~Sk---g~ii~~~-r~dll 366 (814)
T COG1201 317 GIDIG-DIDLVIQLGSPKSVNRFLQRIGRAG----HRLGEVSK---GIIIAED-RDDLL 366 (814)
T ss_pred CCCCC-CCEEEEEECCCHHHHHHHHHCCCCC----CCCCCCCC---EEEEECC-HHHHH
T ss_conf 50247-7429998179388888868503146----65688642---7998167-99999