HHsearch alignment for GI: 255764515 and conserved domain: KOG0948
>KOG0948 consensus.
Probab=99.21 E-value=8.7e-10 Score=77.54 Aligned_cols=146 Identities=21% Similarity=0.286 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHH-HCCCCCCEEEEE
Q ss_conf 8747899999999967980999588998689999999999975999499991604656999999998-558888159998
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQR-WSNFSHMNISVI 80 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~k-f~~~~~~~~~~~ 80 (458)
T Consensus 129 ~LDpFQ~~aI~Cidr~eSVLVSAHTSAGKTVVAeYAIA~s-Lr~kQRVIYTSPIKALSNQKYREl~~EF~-----DVGLM 202 (1041)
T KOG0948 129 TLDPFQSTAIKCIDRGESVLVSAHTSAGKTVVAEYAIAMS-LREKQRVIYTSPIKALSNQKYRELLEEFK-----DVGLM 202 (1041)
T ss_pred CCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHH-HHHCCEEEEECHHHHHCCHHHHHHHHHHC-----CCCEE
T ss_conf 3480676545311279638998405788523799999999-87648589607315541154899998846-----36523
Q ss_pred ECCHHHHHHHHCCCCCEEEECCCCHHHHHH---HCCCCCCCCEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEE
Q ss_conf 589789888730779869980642023344---2000113220440453100246543-115677776654305980799
Q gi|255764515|r 81 TGTVKQRTKVLKTPAVLYVINFENLGWLVQ---ELKGTWPFATIVVDESTKLKSFRLR-QGSKTARALAKPAWESERFIE 156 (458)
Q Consensus 81 ~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~---~~~~~~~~~~iIiDEaH~lkn~~~~-~~s~~~~~l~~~~~~~~~~l~ 156 (458)
T Consensus 203 TGDVT-----InP~ASCLVMTTEILRsMLYRGSEvmrEVaW--VIFDEIHYMRDkERGVVWE---ETII-llP~~vr~VF 271 (1041)
T KOG0948 203 TGDVT-----INPDASCLVMTTEILRSMLYRGSEVMREVAW--VIFDEIHYMRDKERGVVWE---ETII-LLPDNVRFVF 271 (1041)
T ss_pred ECCEE-----ECCCCCEEEEHHHHHHHHHHCCCHHHHEEEE--EEEEEEHHCCCCCCCEEEE---EEEE-ECCCCCEEEE
T ss_conf 05446-----6898754533799999987433167552314--8862001001344560235---6678-5366603899
Q ss_pred ECCCCHHHH
Q ss_conf 658402310
Q gi|255764515|r 157 LTGTPSPNG 165 (458)
Q Consensus 157 LTgTPi~n~ 165 (458)
T Consensus 272 LSAT-iPNA 279 (1041)
T KOG0948 272 LSAT-IPNA 279 (1041)
T ss_pred EECC-CCCH
T ss_conf 9565-8777