HHsearch alignment for GI: 255764515 and conserved domain: PRK08074
>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=99.42 E-value=3.4e-10 Score=79.99 Aligned_cols=82 Identities=13% Similarity=0.190 Sum_probs=53.7
Q ss_pred CCHHHHHHCCCCCEEEEHHHHHH---HHHHHHHC--------CCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCC
Q ss_conf 32566541248840342223678---88664100--------02653344589987642458855899844221116220
Q gi|255764515|r 310 KALEVIIEKANAAPIIVAYHFNS---DLARLQKA--------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 378 (458)
Q Consensus 310 ~~l~~il~~~~~~kviif~~~~~---~~~~i~~~--------~~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL 378 (458)
T Consensus 746 ~~i~~l~~~~~G~~LVLFtS~~~L~~v~~~l~~~~~~~~~~ll~Qg~~~~sr~~ll~~F~~~~~svLlGt-~SFwEGVDl 824 (932)
T PRK08074 746 AYIAKIAKATKGRMLVLFTSYEMLKKTYYNLKNEEELEGYVLLAQGVTGGSRARLMKKFQQFDKAILLGT-SSFWEGIDI 824 (932)
T ss_pred HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEC-CCCCCCCCC
T ss_conf 9999999872999999926599999999998643335795599878987509999999984798499965-664356227
Q ss_pred CC-CCCEEEEECCCC
Q ss_conf 01-785999908998
Q gi|255764515|r 379 QY-GGNILVFFSLWW 392 (458)
Q Consensus 379 ~~-a~~~iI~~~~~w 392 (458)
T Consensus 825 pGd~L~~ViI~kLPF 839 (932)
T PRK08074 825 PGDELSCLVIVRLPF 839 (932)
T ss_pred CCCCEEEEEEEECCC
T ss_conf 998868999980899