HHsearch alignment for GI: 255764515 and conserved domain: PRK10590
>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=99.95 E-value=5.7e-25 Score=169.49 Aligned_cols=320 Identities=17% Similarity=0.204 Sum_probs=200.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-HHHHHHHHHCC-----CC--CEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf 874789999999996798099958899868999-99999999759-----99--49999160465699999999855888
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSV-LTALSYIHLWG-----EK--SVLVIAPLRVAQSVWTSEVQRWSNFS 73 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~a-l~~~~~l~~~~-----~~--~~LIv~P~~l~~~~W~~Ei~kf~~~~ 73 (458)
T Consensus 23 ~PTpIQ~~aIP~iL~GrDvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTRELA~Qi~~~~~~l~~~~ 102 (457)
T PRK10590 23 EPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL 102 (457)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999997799889988981189999999999998636765445688249997687999999999999742558
Q ss_pred CCEEEEEECCH--HHHHHHHCCCCCEEEECCCCHHHHHHH-CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 81599985897--898887307798699806420233442-000113220440453100246543115677776654305
Q gi|255764515|r 74 HMNISVITGTV--KQRTKVLKTPAVLYVINFENLGWLVQE-LKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWE 150 (458)
Q Consensus 74 ~~~~~~~~g~~--~~r~~~~~~~~~i~i~s~e~~~~~~~~-~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~ 150 (458)
T Consensus 103 ~~~~~~~~Gg~~~~~q~~~l~~~~dIlVaTPGRLldl~~~~~~~l~~v~~lVlDEAD~mLd~gF~--~di-~~Il~~lp~ 179 (457)
T PRK10590 103 NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFI--HDI-RRVLAKLPA 179 (457)
T ss_pred CCEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCCH--HHH-HHHHHHCCC
T ss_conf 94599997997775999986189998998928889888626776575239998370565156653--668-999863876
Q ss_pred CCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98079965840231001013467751788877532778877736956403300002455554558999997424543320
Q gi|255764515|r 151 SERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDCCLSLD 230 (458)
Q Consensus 151 ~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 230 (458)
T Consensus 180 ~rQ~llfSAT~-~~~v~~--------------------l~~~~l~~p---------------------------~~i~v- 210 (457)
T PRK10590 180 KRQNLLFSATF-SDDIKA--------------------LAEKLLHNP---------------------------LEIEV- 210 (457)
T ss_pred CCEEEEEECCC-CHHHHH--------------------HHHHHCCCC---------------------------EEEEE-
T ss_conf 52689995048-889999--------------------999976898---------------------------89996-
Q ss_pred CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf 00010010011000345245368998889999998510334520223478888754203541000223430001343333
Q gi|255764515|r 231 IADYQNIDKPILITKKVPLPQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 310 (458)
Q Consensus 231 ~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~~~~k~~ 310 (458)
T Consensus 211 -~~~~~~~~-~-i~q~~~~v-----------------------------------------------------~~~~k~~ 234 (457)
T PRK10590 211 -ARRNTASE-Q-VTQHVHFV-----------------------------------------------------DKKRKRE 234 (457)
T ss_pred -CCCCCCCC-C-EEEEEEEE-----------------------------------------------------CHHHHHH
T ss_conf -36766561-3-04899995-----------------------------------------------------6678999
Q ss_pred CHHHHHHCCCCCEEEEHHHHHHHHHHHHH----------CCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCC
Q ss_conf 25665412488403422236788866410----------00265334458998764245885589984422111622001
Q gi|255764515|r 311 ALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 380 (458)
Q Consensus 311 ~l~~il~~~~~~kviif~~~~~~~~~i~~----------~~~~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL~~ 380 (458)
T Consensus 235 ~L~~ll~~~~~~~~iIF~~tk~~a~~l~~~L~~~g~~~~~lHg~~sq~~R~~~l~~F~~g~~~vLVaT-DvaaRGiDi~~ 313 (457)
T PRK10590 235 LLSQMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT-DIAARGLDIEE 313 (457)
T ss_pred HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEC-CCCCCCCCCCC
T ss_conf 99999861586633588411999999999985569982323247899999999999986998299957-70115566356
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 785999908998986864456666202202037877528999985899689999999999
Q gi|255764515|r 381 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 440 (458)
Q Consensus 381 a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v~v~~li~~~tide~i~~~~~~K 440 (458)
T Consensus 314 -V~~VInyD~P~~~e~YvHRiGRTG-----RaG~~--G~ait~v~~~--e~~~~~~ie~~ 363 (457)
T PRK10590 314 -LPHVVNYELPNVPEDYVHRIGRTG-----RAAAT--GEALSLVCVD--EHKLLRDIEKL 363 (457)
T ss_pred -CCEEEEECCCCCHHHEECCCCCCC-----CCCCC--EEEEEEECHH--HHHHHHHHHHH
T ss_conf -887999389997445002267060-----58995--3699986689--99999999999