HHsearch alignment for GI: 255764515 and conserved domain: PRK11448
>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional.
Probab=99.94 E-value=7.5e-26 Score=174.85 Aligned_cols=350 Identities=15% Similarity=0.139 Sum_probs=178.0
Q ss_pred CCCCHHHHHHHHHHH-----HCCCEEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHHHHHHHCCCCC
Q ss_conf 987478999999999-----679809995889986899999999999759-99499991604656999999998558888
Q gi|255764515|r 1 MNLAPHQTKIVDWIL-----DHKRCAIWASMGSGKTVSVLTALSYIHLWG-EKSVLVIAPLRVAQSVWTSEVQRWSNFSH 74 (458)
Q Consensus 1 ~~L~p~Q~~~v~~~~-----~~~~~ll~~~~G~GKT~~al~~~~~l~~~~-~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~ 74 (458)
T Consensus 415 i~lR~YQ~~AI~~v~~a~~~~~rraLl~MATGTGKTrtaial~~rLlk~~~~kRILFLvDR~~L~~QA~~~F~~~~~~~~ 494 (1126)
T PRK11448 415 LGLRYYQEDAIQAVEKALANGQREILLAMATGTGKTRTAIALMYRLLKAKRFKRILFLVDRRALGEQALDAFKDTKIEGN 494 (1126)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 77868899999999999980985468872488858989999999999658767257985658999999998754345456
Q ss_pred CEEEEEECCHHHHHHHHCCCCCEEEECCCCHHHHHH-----HCCCCCCCCEEECCCCCCCCCCC------------CCCH
Q ss_conf 159998589789888730779869980642023344-----20001132204404531002465------------4311
Q gi|255764515|r 75 MNISVITGTVKQRTKVLKTPAVLYVINFENLGWLVQ-----ELKGTWPFATIVVDESTKLKSFR------------LRQG 137 (458)
Q Consensus 75 ~~~~~~~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~-----~~~~~~~~~~iIiDEaH~lkn~~------------~~~~ 137 (458)
T Consensus 495 ~~~~~~~~v~~l~~~~~~~~~rv~isT~q~m~~~i~~~~~~~~~~~~~FDlIIiDEaHRgy~ld~em~e~e~~~rd~~s~ 574 (1126)
T PRK11448 495 QTFASIYDIKGLTDKFPEDETKVHVATVQSMVKRILQSDDSEPPPVGQYDCIVVDEAHRGYTLDKEMTEGELQFRDQLDY 574 (1126)
T ss_pred CCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHH
T ss_conf 66400220010256787877719997307899875235767799998513798977878874332311000102320247
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 56777766543059807996584023100101346775178887753277887773695640330000245555455899
Q gi|255764515|r 138 SKTARALAKPAWESERFIELTGTPSPNGLIDLWGQIWFLDKGKRLGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKE 217 (458)
Q Consensus 138 s~~~~~l~~~~~~~~~~l~LTgTPi~n~~~el~~ll~~l~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (458)
T Consensus 575 ~skyr~IldYFD--A~~iGLTATP~~~-T~~~Fg--------~P~--~~Ys~~eAV~DG~LVd~~~-P~~i--------- 631 (1126)
T PRK11448 575 VSKYRRVLDYFD--AVKIGLTATPALH-TTEIFG--------EPV--YTYSYREAVIDGYLIDHEP-PIRI--------- 631 (1126)
T ss_pred HHHHHHHHHHHH--HHHHCCCCCCCCC-HHHHHC--------CCC--EEECHHHHHCCCCCCCCCC-CEEE---------
T ss_conf 778999987621--5540476799955-567709--------973--0005888730475568868-8799---------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH-HHCCCC-CCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999742454332000010010011000345245368998889999998-510334-520223478888754203541000
Q gi|255764515|r 218 IEAQLSDCCLSLDIADYQNIDKPILITKKVPLPQPVMKQYHKFQRELY-CDLQGE-NIEAFNSASKTVKCLQLANGAVYY 295 (458)
Q Consensus 218 l~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~l~~~~~~~y~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~q~~~~~~~~ 295 (458)
T Consensus 632 -~T~l~~~Gi~~~-------------------~~e~~~~~~~~~~~~~~~~~~de~~~~~----~~fnr--~v~~----- 680 (1126)
T PRK11448 632 -ETKLAKEGIHFE-------------------KGEQVEVINTQTGEIDNDTLEDELDFEV----EDFNR--RVIT----- 680 (1126)
T ss_pred -EEEEECCCCCCC-------------------CCCHHHHCCCHHHHHHCCCCCCCCCCCH----HHHCC--HHCC-----
T ss_conf -756510460358-------------------7643442030000020255873133788----88273--2038-----
Q ss_pred CCCCCCHHCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHH----HHHHCCCC--------------CCCHHHHHHHHHHH
Q ss_conf 2234300013433332566541248840342223678886----64100026--------------53344589987642
Q gi|255764515|r 296 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----RLQKAFPQ--------------GRTLDKDPCTIQEW 357 (458)
Q Consensus 296 ~~~~~~~~~~~~k~~~l~~il~~~~~~kviif~~~~~~~~----~i~~~~~~--------------g~~~~~r~~~i~~f 357 (458)
T Consensus 681 -~-----~~nr~v~~~l~~~~~~~~~gKTiIFA~~~~HAd~Iv~~l~e~F~~~y~~~~~~~~~~It~~-~~~~~~lI~~F 753 (1126)
T PRK11448 681 -E-----SFNRVVCEELAKYLDPTGEGKTLIFCVTDAHADMVVRLLKEAFKKKYGQVEDDAIIKITGD-ADKVQQLIRRF 753 (1126)
T ss_pred -H-----HHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCCHHHHHHHH
T ss_conf -3-----4799999999984588999876999278699999999999998864787678448997088-84478999972
Q ss_pred CCCCCCEEEEEHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCC
Q ss_conf 45885589984422111622001785999908998986864456666202202037
Q gi|255764515|r 358 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 413 (458)
Q Consensus 358 ~~~~~~vli~s~~~~~~GlnL~~a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~G 413 (458)
T Consensus 754 kn~~~P~IAVTVDmL~TGiDVPei~n-LVF~R~V~S~i~F~QMiGRGTRlc~~-i~ 807 (1126)
T PRK11448 754 KNERLPNIVVTVDLLTTGIDVPSICN-LVFLRRVKSRILYEQMKGRATRLCPD-IG 807 (1126)
T ss_pred CCCCCCEEEEEECCCCCCCCCCCCEE-EEEEEECCCHHHHHHHHCCCCCCCCC-CC
T ss_conf 57899838998562104766642016-88766756677866541675543766-68