HHsearch alignment for GI: 255764515 and conserved domain: PRK11773
>PRK11773 uvrD DNA-dependent helicase II; Provisional.
Probab=95.58 E-value=0.022 Score=32.73 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH-CCCC--CEEEEE
Q ss_conf 874789999999996798099958899868999999999997-5999--499991
Q gi|255764515|r 2 NLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHL-WGEK--SVLVIA 53 (458)
Q Consensus 2 ~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~-~~~~--~~LIv~ 53 (458)
T Consensus 9 ~LN~~Q~~AV~~~--~g~~lV~AGaGSGKT~vL~~Ria~Li~~~gv~p~~ILalT 61 (722)
T PRK11773 9 SLNDKQREAVAAP--LGNMLVLAGAGSGKTRVLVHRIAWLMQVENASPYSILAVT 61 (722)
T ss_pred HCCHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 2699999998099--9987999738715999999999999982999878828984