HHsearch alignment for GI: 255764515 and conserved domain: PRK13766
>PRK13766 Hef nuclease; Provisional.
Probab=100.00 E-value=4.8e-42 Score=272.95 Aligned_cols=426 Identities=15% Similarity=0.122 Sum_probs=240.4
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 98747899999999967980999588998689999999999975999499991604656999999998558888159998
Q gi|255764515|r 1 MNLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVI 80 (458)
Q Consensus 1 ~~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~ 80 (458)
T Consensus 14 ie~R~YQ~el~~~Al~-~NtiVvLPTG~GKT~IA~lvi~~~l~~~~gKilFLaPT~pLV~Qq~~~~~~~l~i~~~~i~~l 92 (764)
T PRK13766 14 IEARLYQQLLAAKALK-GNTLVVLPTGLGKTAIALLVIAERLQKYGGKVLILAPTKPLVEQHAEFFRKFLNIDPEKIVVL 92 (764)
T ss_pred CCCCHHHHHHHHHHHH-CCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 7653879999999985-898999599866899999999999974898899985888899999999999709995528999
Q ss_pred ECC--HHHHHHHHCCCCCEEEECCCCHHHHHHH-CCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 589--7898887307798699806420233442-0001132204404531002465431156777766543059807996
Q gi|255764515|r 81 TGT--VKQRTKVLKTPAVLYVINFENLGWLVQE-LKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIEL 157 (458)
Q Consensus 81 ~g~--~~~r~~~~~~~~~i~i~s~e~~~~~~~~-~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~L 157 (458)
T Consensus 93 tG~~~~~~r~~~w~-~~~Viv~TPQvl~ndL~~g~i~l~dv~lLVfDEaHha~G--nh~Y~~I~~~y~~~-~~~PrILGL 168 (764)
T PRK13766 93 TGEISPEKRAALWE-KAKVIVATPQVIENDLLAGRISLEDVSLLIFDEAHRAVG--NYAYVFIAERYHED-AKNPLVLGL 168 (764)
T ss_pred ECCCCHHHHHHHHC-CCCEEEECCHHHHHHHHHCCCCHHHCCEEEEECCCCCCC--CCCHHHHHHHHHHC-CCCCEEEEE
T ss_conf 88878276899860-799999990899999982986788822899974666667--76289999999853-778558850
Q ss_pred CCCCHHHHCCCHHHHHHHCCCCCC-CCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 584023100101346775178887-7532778877736956403300002455554558999997424543320000100
Q gi|255764515|r 158 TGTPSPNGLIDLWGQIWFLDKGKR-LGRVFQSFVARWFNTTQIGSHIGAVRYTAKETAQKEIEAQLSDCCLSLDIADYQN 236 (458)
Q Consensus 158 TgTPi~n~~~el~~ll~~l~~~~~-l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 236 (458)
T Consensus 169 TASPGs~-~e~I~ev~~nL~i~~ie~rte~d~dv~~yv~~~~ie~i~V~l~-~~~~~i~~~l~~~l~~~l~~L~~~~~~- 245 (764)
T PRK13766 169 TASPGSD-EEKIKEVCENLGIEHVEVKTEDDPDVRPYVHKVKVEWIRVELP-EELKEIRDLLNEALKDRLKKLKELGVI- 245 (764)
T ss_pred CCCCCCC-HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHCCCE-
T ss_conf 3688764-4899999986598728961444434454335673279980797-899999999999999999999966970-
Q ss_pred CCCCCEEEEEEECCHHHHH----------------HHH------HHHH--HHHHHCCCCCCHHH-HHHHHHH--------
Q ss_conf 1001100034524536899----------------888------9999--99851033452022-3478888--------
Q gi|255764515|r 237 IDKPILITKKVPLPQPVMK----------------QYH------KFQR--ELYCDLQGENIEAF-NSASKTV-------- 283 (458)
Q Consensus 237 l~~~~~~~~~v~l~~~~~~----------------~y~------~~~~--~~~~~~~~~~~~~~-~~~~~~~-------- 283 (458)
T Consensus 246 --~~----~~~~~sk~~l~~~~~~~~~~i~~~~~~~~~~~~~~a~~~kl~~a~ell~tqg~~~~~~yl~~l~~~~~~~~~ 319 (764)
T PRK13766 246 --VS----ISPDVSKKELLGLQKRIQQEIARGDPEGYEAISIHAEAMKLRHAVELLETQGVEALRRYLERLREEARSSGS 319 (764)
T ss_pred --EC----CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf --04----555468999999999999988646879999999999999999999999985189999999999973013332
Q ss_pred -HHHHCCCCCCCCC--CCCCCHHCCCCCCCCHHHHHHC----CCCCEEEEHHHHHHHHHHHHHCC----------C----
Q ss_conf -7542035410002--2343000134333325665412----48840342223678886641000----------2----
Q gi|255764515|r 284 -KCLQLANGAVYYD--EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAF----------P---- 342 (458)
Q Consensus 284 -~l~q~~~~~~~~~--~~~~~~~~~~~k~~~l~~il~~----~~~~kviif~~~~~~~~~i~~~~----------~---- 342 (458)
T Consensus 320 k~~k~l~~d~~~~~~~~~~~~~~~~hPKl~kL~eiL~~~~~~~~~sRvIIFv~~R~Ta~~L~~~L~~~~ik~~~fVGq~s 399 (764)
T PRK13766 320 KASKRLVEDPRFKKAVRLLKELDIEHPKLEKLLEIVKEQLGKKPDSRIIVFTQYRDTAEKIVDLLNKNGIKAIRFVGQAS 399 (764)
T ss_pred HHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 67899875877899999876446789379999999999972699980899927679999999998658997228983689
Q ss_pred ----CCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCCCCE
Q ss_conf ----6533445899876424588558998442211162200178599990899898686445666620220203787752
Q gi|255764515|r 343 ----QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 418 (458)
Q Consensus 343 ----~g~~~~~r~~~i~~f~~~~~~vli~s~~~~~~GlnL~~a~~~iI~~~~~wn~~~~~Q~~gRi~~~r~hR~Gq~~~v 418 (458)
T Consensus 400 ~~~~kGmsqkeQ~evL~~FR~Ge~NvLVAT-SV~EEGLDIP-~cdLVI~Yd~v~S~IR~IQR~GR--------TGR~r~G 469 (764)
T PRK13766 400 RDGDKGMSQKEQIETLDRFRAGEYNVLVAT-SVAEEGLDIP-SVDLVIFYEPVPSEIRSIQRKGR--------TGRQRGG 469 (764)
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEEEEC-CHHHCCCCCC-CCCEEEEECCCCCHHHHHHHCCC--------CCCCCCC
T ss_conf 878889898999999999857998889876-7664488887-78889993799619999997466--------5677897
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999858996899999999999999999855
Q gi|255764515|r 419 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 450 (458)
Q Consensus 419 ~v~~li~~~tide~i~~~~~~K~~~~~~~~~~ 450 (458)
T Consensus 470 ~v~vLi~~gt~de~~~~~~~~kek~m~~~l~~ 501 (764)
T PRK13766 470 RVVVLIAKGTRDEAYYWSSRRKEKKMKEILKN 501 (764)
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 49999956862677888511206899999999