>TIGR02397 dnaX_nterm DNA polymerase III, subunits gamma and tau; InterPro: IPR012763 This entry represents the well-conserved first N-terminal domain of DnaX, approx. 365 aa. The full-length product of the dnaX gene in Escherichia coli encodes the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the extreme thermophile Thermus thermophilis.; GO: 0003887 DNA-directed DNA polymerase activity, 0005524 ATP binding, 0006260 DNA replication, 0009360 DNA polymerase III complex.

Probab=96.40 E-value=0.037 Score=31.34 Aligned_cols=125 Identities=19% Similarity=0.260 Sum_probs=67.5 Q ss_pred HHHHHHHH---HHCC---CEEEE-ECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE Q ss_conf 99999999---9679---80999-58899868999999999997599949999160465699999999855888815999 Q gi|255764515|r 7 QTKIVDWI---LDHK---RCAIW-ASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISV 79 (458) Q Consensus 7 Q~~~v~~~---~~~~---~~ll~-~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~ 79 (458) T Consensus 19 Q~~iv~tL~NAi~~~ri~HAYLF~GpRGtGKTS~ARIfAKaLNC~~~~~----~PCn~C~~--C~~i~---~g~~~DviE 89 (363) T TIGR02397 19 QEHIVKTLKNAIKNGRIAHAYLFSGPRGTGKTSIARIFAKALNCQGPDG----EPCNECES--CKEIN---SGSSLDVIE 89 (363) T ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCC----CCCCCCCH--HHHHH---CCCCCCEEE T ss_conf 1799999999997189662345028599763558999999865887877----87777502--27765---289866688 Q ss_pred EECCHHHHHHHHCCCCCEEEECCCCHHHHHHHCC---CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEE Q ss_conf 8589789888730779869980642023344200---0113220440453100246543115677776654305-98079 Q gi|255764515|r 80 ITGTVKQRTKVLKTPAVLYVINFENLGWLVQELK---GTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWE-SERFI 155 (458) Q Consensus 80 ~~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~~~~---~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~-~~~~l 155 (458) T Consensus 90 iDAASN~gVD--------------~IR~l~e~v~y~P~~~kYKvYIIDEVHML-------S~~AFNALLKTLEEPP~hV~ 148 (363) T TIGR02397 90 IDAASNNGVD--------------DIRELRENVKYAPSKGKYKVYIIDEVHML-------SKSAFNALLKTLEEPPEHVV 148 (363) T ss_pred ECCCCCCCHH--------------HHHHHHHHHCCCCCCCCCCEEEEECCCCC-------CHHHHHHHHHHHCCCCCCEE T ss_conf 6486568788--------------99999873036875544335887323028-------65689998765227987628 Q ss_pred EECCCC Q ss_conf 965840 Q gi|255764515|r 156 ELTGTP 161 (458) Q Consensus 156 ~LTgTP 161 (458) T Consensus 149 FIlATT 154 (363) T TIGR02397 149 FILATT 154 (363) T ss_pred EEEECC T ss_conf 887348

HHsearch alignment for GI: 255764515 and conserved domain: TIGR02397