HHsearch alignment for GI: 255764515 and conserved domain: TIGR02538
>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB; InterPro: IPR013374 This model describes a protein involved in type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly, and is closely related to GspE (IPR013369 from INTERPRO) of type II secretion systems (also referred to as the main terminal branch of the general secretion pathway). Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0009297 pilus biogenesis.
Probab=94.47 E-value=0.044 Score=30.84 Aligned_cols=33 Identities=9% Similarity=-0.060 Sum_probs=13.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 536899888999999851033452022347888875
Q gi|255764515|r 250 PQPVMKQYHKFQRELYCDLQGENIEAFNSASKTVKC 285 (458)
Q Consensus 250 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (458)
T Consensus 311 eP~Qk~~fL~Ai~k---PqGMvLVTGPTGSGKTVSL 343 (577)
T TIGR02538 311 EPDQKALFLEAIHK---PQGMVLVTGPTGSGKTVSL 343 (577)
T ss_pred CHHHHHHHHHHHHC---CCCCEEEECCCCCCHHHHH
T ss_conf 88899999999707---9972886266598416878