HHsearch alignment for GI: 255764515 and conserved domain: cd01122
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=93.66 E-value=0.45 Score=24.76 Aligned_cols=50 Identities=16% Similarity=0.009 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHHC---C-CEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 747899999999967---9-809995889986899999999999759994999916
Q gi|255764515|r 3 LAPHQTKIVDWILDH---K-RCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAP 54 (458)
Q Consensus 3 L~p~Q~~~v~~~~~~---~-~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P 54 (458)
T Consensus 14 ~~pf~~--LD~~~~Gl~~GeL~viaarpg~GKT~f~~~~a~~~~~~~g~~vl~~Sl 67 (271)
T cd01122 14 WWPFPV--LNKLTKGLRKGELIILTAGTGVGKTTFLREYALDLITQHGVRVGTISL 67 (271)
T ss_pred CCCCHH--HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 588166--888737999980899996899869999999999999976990899970