HHsearch alignment for GI: 255764515 and conserved domain: pfam02399
>pfam02399 Herpes_ori_bp Origin of replication binding protein. This Pfam family represents the herpesvirus origin of replication binding protein, probably involved in DNA replication.
Probab=97.90 E-value=0.00012 Score=46.49 Aligned_cols=133 Identities=19% Similarity=0.247 Sum_probs=72.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHH-HHHHCCCCCCEEEEEECCHHHHHHHHCCCCCE
Q ss_conf 099958899868999999999997599949999-1604656999999-99855888815999858978988873077986
Q gi|255764515|r 20 CAIWASMGSGKTVSVLTALSYIHLWGEKSVLVI-APLRVAQSVWTSE-VQRWSNFSHMNISVITGTVKQRTKVLKTPAVL 97 (458)
Q Consensus 20 ~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv-~P~~l~~~~W~~E-i~kf~~~~~~~~~~~~g~~~~r~~~~~~~~~i 97 (458)
T Consensus 52 ~VVRAPMGSGKTTALi~wL~~~L~~~d~SvLVVSCRRS-----FT~tL~~Rf~~aGL~gFvtY~~s~~y-i-m~~~~f~R 124 (829)
T pfam02399 52 LVVRAPMGSGKTTALIEWLRAALDSPDTSVLVVSCRRS-----FTQTLLDRFNDAGLTGFVTYLDSTDY-V-MNGRPFRR 124 (829)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHH-----HHHHHHHHHHHCCCCCCEEEEECCCE-E-ECCCCCCE
T ss_conf 89976888871899999999973786654999970167-----89999999986698651357504434-7-67875323
Q ss_pred EEECCCCHHHHHHHCCCCCCCCEEECCCCCCCCC----CCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 9980642023344200011322044045310024----654311567777665430598079965840
Q gi|255764515|r 98 YVINFENLGWLVQELKGTWPFATIVVDESTKLKS----FRLRQGSKTARALAKPAWESERFIELTGTP 161 (458)
Q Consensus 98 ~i~s~e~~~~~~~~~~~~~~~~~iIiDEaH~lkn----~~~~~~s~~~~~l~~~~~~~~~~l~LTgTP 161 (458)
T Consensus 125 LiVQiESLHRV~~~ll~~--YDvLILDEVMSti~QlySpTM~~L~~VDall~~LLr~CprIIAMDAT~ 190 (829)
T pfam02399 125 LIVQIESLHRVDENLLNN--YDVLILDEVMSTIGQLYSPTMRRLKEVDALLLRLLRNCPRIIAMDATV 190 (829)
T ss_pred EEEEEECCCCCCHHHCCC--CCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf 688851111388334256--677985778888887606888999999999999985498279840204