HHsearch alignment for GI: 255764515 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=99.85 E-value=7.3e-21 Score=144.62 Aligned_cols=101 Identities=25% Similarity=0.363 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 98747899999999967980999588998689999999999975999499991604656999999998558888159998
Q gi|255764515|r 1 MNLAPHQTKIVDWILDHKRCAIWASMGSGKTVSVLTALSYIHLWGEKSVLVIAPLRVAQSVWTSEVQRWSNFSHMNISVI 80 (458)
Q Consensus 1 ~~L~p~Q~~~v~~~~~~~~~ll~~~~G~GKT~~al~~~~~l~~~~~~~~LIv~P~~l~~~~W~~Ei~kf~~~~~~~~~~~ 80 (458)
T Consensus 2 ~~LR~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~~-~~~~lvlvp~~~L~~Q~~~~~-------------- 66 (103)
T pfam04851 2 LELRPYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLKG-KKKVLFLVPRKDLLEQALEEF-------------- 66 (103)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHH--------------
T ss_conf 98729999999999963986999589998799999999999846-992999908299999999965--------------
Q ss_pred ECCHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 58978988873077986998064202334420001132204404531002465431156777766543059807996584
Q gi|255764515|r 81 TGTVKQRTKVLKTPAVLYVINFENLGWLVQELKGTWPFATIVVDESTKLKSFRLRQGSKTARALAKPAWESERFIELTGT 160 (458)
Q Consensus 81 ~g~~~~r~~~~~~~~~i~i~s~e~~~~~~~~~~~~~~~~~iIiDEaH~lkn~~~~~~s~~~~~l~~~~~~~~~~l~LTgT 160 (458)
T Consensus 67 ---------------------------------------lii~DE~H~~~a------~~~~~~l~~-~~~~~~~lGlTAT 100 (103)
T pfam04851 67 ---------------------------------------VIIIDEAHHSSA------KTKYRKILE-YFKPAFLLGLTAT 100 (103)
T ss_pred ---------------------------------------HHHHHHHHHCCC------HHHHHHHHH-HCCCCEEEEEEEC
T ss_conf ---------------------------------------646016352353------789999999-5772608998008
Q ss_pred CH
Q ss_conf 02
Q gi|255764515|r 161 PS 162 (458)
Q Consensus 161 Pi 162 (458)
T Consensus 101 P~ 102 (103)
T pfam04851 101 PE 102 (103)
T ss_pred CC
T ss_conf 88