RPSBLAST alignment for GI: 255764515 and conserved domain: KOG0387

>gnl|CDD|35608 KOG0387, KOG0387, KOG0387, Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) [Transcription, Replication, recombination and repair]. Length = 923

 Score = 51.9 bits (124), Expect = 4e-07
 Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 31/199 (15%)

Query: 3   LAPHQTKIVDWIL---DHKRCAIWA-SMGSGKTVSVLTALSYIHLWG--EKSVLVIAPLR 56
           L P+Q + V W+      +   I    MG GKT+ +++ L+ +H  G   K  L++ P  
Sbjct: 206 LFPYQREGVQWLWELYCQRAGGILGDEMGLGKTIQIISFLAALHHSGKLTKPALIVCPAT 265

Query: 57  VAQSVWTSEVQRWSNFSHMNISVITGTV-------------KQRTKVLKTPAVLYVINFE 103
           +    W  E Q W     + I   TG+              K   + + T   + +  ++
Sbjct: 266 IIHQ-WMKEFQTWWPPFRVFILHGTGSGARYDASHSSHKKDKLLIRKVATDGGILITTYD 324

Query: 104 NLGWLVQELKG-TWPFATIVVDESTKLKSFRLRQGSKTARALA-KPAWESERFIELTGTP 161
                  +L G  W +   ++DE  ++++        +  +LA K      R I L+GTP
Sbjct: 325 GFRIQGDDLLGILWDYV--ILDEGHRIRN------PNSKISLACKKIRTVHRII-LSGTP 375

Query: 162 SPNGLIDLWGQIWFLDKGK 180
             N L +LW    F+  GK
Sbjct: 376 IQNNLTELWSLFDFVFPGK 394