BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764517|ref|YP_003084345.1| hypothetical protein
CLIBASIA_05538 [Candidatus Liberibacter asiaticus str. psy62]
(135 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|255764517|ref|YP_003084345.1| hypothetical protein CLIBASIA_05538 [Candidatus Liberibacter
asiaticus str. psy62]
gi|307601368|gb|ACT66821.3| hypothetical protein CLIBASIA_05538 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 135
Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats.
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD 60
MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD
Sbjct: 1 MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD 60
Query: 61 VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET 120
VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET
Sbjct: 61 VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET 120
Query: 121 IVSDLNNMKNRIQDL 135
IVSDLNNMKNRIQDL
Sbjct: 121 IVSDLNNMKNRIQDL 135
>gi|317120667|gb|ADV02490.1| hypothetical protein SC1_gp025 [Liberibacter phage SC1]
gi|317120811|gb|ADV02632.1| hypothetical protein SC1_gp025 [Candidatus Liberibacter asiaticus]
Length = 707
Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats.
Identities = 134/135 (99%), Positives = 135/135 (100%)
Query: 1 MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD 60
MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD
Sbjct: 1 MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD 60
Query: 61 VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET 120
VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET
Sbjct: 61 VDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVET 120
Query: 121 IVSDLNNMKNRIQDL 135
IVSDLNNMKNRIQ+L
Sbjct: 121 IVSDLNNMKNRIQEL 135
>gi|255764516|ref|YP_003084344.1| hypothetical protein CLIBASIA_05532 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254547867|gb|ACT66820.1| hypothetical protein CLIBASIA_05532 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 341
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 10/123 (8%)
Query: 7 MEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNA 66
M + NFEQ+K V+Y GS FVIPW +KDPSRIHAEV Y DG ++EL+ +DF VD +
Sbjct: 1 MMQYNFEQSKDVSYRLFGSYFVIPWTVKDPSRIHAEVKYPDGNMEELSPERDFKVDVDES 60
Query: 67 LLTVNNRE----GDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVETIV 122
L ++++ + +RIFEGEKQTFK++N + + K + L +++ ++ IV
Sbjct: 61 SLILSSKRWINNNNALRIFEGEKQTFKDFNIEVQK------KVNQVNVLTQKMNTIDGIV 114
Query: 123 SDL 125
+DL
Sbjct: 115 NDL 117
>gi|317120708|gb|ADV02530.1| hypothetical protein SC2_gp020 [Liberibacter phage SC2]
gi|317120769|gb|ADV02590.1| hypothetical protein SC2_gp020 [Candidatus Liberibacter asiaticus]
Length = 280
Score = 180 bits (457), Expect = 5e-44, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 10/123 (8%)
Query: 7 MEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNA 66
M + NFEQ+K V+Y GS FVIPW +KDPSRIHAEV Y DG ++EL+ +DF VD +
Sbjct: 1 MMQYNFEQSKDVSYRLFGSYFVIPWTVKDPSRIHAEVKYPDGNMEELSPERDFKVDVDES 60
Query: 67 LLTVNNRE----GDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADLYPLHNRLDGVETIV 122
L ++++ + +RIFEGEKQTFK++N + + K + L +++ ++ IV
Sbjct: 61 SLILSSKRWINNNNALRIFEGEKQTFKDFNIEVQK------KVNQVNVLTQKMNTIDGIV 114
Query: 123 SDL 125
+DL
Sbjct: 115 NDL 117
>gi|315122307|ref|YP_004062796.1| hypothetical protein CKC_02795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495709|gb|ADR52308.1| hypothetical protein CKC_02795 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 176
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/115 (47%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 7 MEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNA 66
M K NFEQ KSV+Y + S+FVIPW+I+D +IHAEV SDGR EL + DF+VD +
Sbjct: 1 MVKRNFEQDKSVSYSLLTSRFVIPWEIEDYRKIHAEVETSDGRRNELVLEDDFEVDCEDN 60
Query: 67 LLTVNNRE-GDFIRIFEGEKQTFKEYNSDSP-RAPHNLVKEADLYPLHNRLDGVE 119
LT+ N + +RI++GEKQ K Y+ D ++PHNL++ DL P++ RL+ +E
Sbjct: 61 FLTLKNTDLKGILRIYDGEKQELK-YSIDPNIQSPHNLLRYGDLSPIYLRLENLE 114
>gi|315121953|ref|YP_004062442.1| hypothetical protein CKC_01015 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122920|ref|YP_004063409.1| hypothetical protein CKC_05880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495355|gb|ADR51954.1| hypothetical protein CKC_01015 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496322|gb|ADR52921.1| hypothetical protein CKC_05880 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 521
Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 SVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFDVDGLNALLTVNNREGD 76
S++Y S ++IPW+ DP+ +HAE + + L ++F VD +LT+ +
Sbjct: 12 SISYVCTTSYYIIPWNFDDPTTVHAEFVKGE-ESKPLEYGEEFTVDCDEGMLTLLTDYNN 70
Query: 77 F--IRIFEGEKQTF 88
+ IFEGE+ +
Sbjct: 71 SDTLHIFEGERLKY 84
>gi|2245072|emb|CAB10495.1| hypothetical protein [Arabidopsis thaliana]
gi|7268465|emb|CAB80985.1| hypothetical protein [Arabidopsis thaliana]
Length = 1322
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 26/144 (18%)
Query: 3 RKVNMEKLNFEQTKSVTYWAVGSKF--------VIPWDIKDPSRIHAEVGYSDGRVQELA 54
R V E + +Q ++W G K I + +D R++ +GY +G E +
Sbjct: 370 RSVQAENYSKKQQAKSSWWPFGGKSEVSGGEGESIQFTDEDWERLNKVIGYKEG--DEQS 427
Query: 55 ISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNL---VKEADLYPL 111
I + D L+ L V + ++++GEK+ E + + L K AD+
Sbjct: 428 IINNAKPDALHTFLEVQMKR-SASKLYDGEKECLAELSCEGLNCSVKLFPETKIADIKLG 486
Query: 112 HNRL------------DGVETIVS 123
RL D ++ IV+
Sbjct: 487 RYRLSSPSGLLAEYLKDSIDGIVN 510
>gi|297800398|ref|XP_002868083.1| hypothetical protein ARALYDRAFT_355042 [Arabidopsis lyrata subsp.
lyrata]
gi|297313919|gb|EFH44342.1| hypothetical protein ARALYDRAFT_355042 [Arabidopsis lyrata subsp.
lyrata]
Length = 4274
Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 3 RKVNMEKLNFEQTKSVTYWAVGSKF--------VIPWDIKDPSRIHAEVGYSDGRVQELA 54
R V E + +Q ++W G K I + +D R++ +GY +G E +
Sbjct: 423 RSVQAENYSKKQQAKSSWWPFGGKSEVSEGEGESIQFTDEDWERLNKVIGYKEG--DEQS 480
Query: 55 ISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNL---VKEADLYPL 111
I + D L+ L V + ++++GEK+ E + + L K AD+
Sbjct: 481 IINNAKPDALHTFLEVQMKR-SASKLYDGEKECLAELSCEGLNCSVKLFPETKIADIKLG 539
Query: 112 HNRLDGVETIVSD 124
RL ++++
Sbjct: 540 RYRLSSPSGLLAE 552
>gi|332658453|gb|AEE83853.1| pleckstrin homology (PH) domain-containing protein [Arabidopsis
thaliana]
Length = 4219
Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 3 RKVNMEKLNFEQTKSVTYWAVGSKF--------VIPWDIKDPSRIHAEVGYSDGRVQELA 54
R V E + +Q ++W G K I + +D R++ +GY +G E +
Sbjct: 417 RSVQAENYSKKQQAKSSWWPFGGKSEVSGGEGESIQFTDEDWERLNKVIGYKEG--DEQS 474
Query: 55 ISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNL---VKEADLYPL 111
I + D L+ L V + ++++GEK+ E + + L K AD+
Sbjct: 475 IINNAKPDALHTFLEVQMKR-SASKLYDGEKECLAELSCEGLNCSVKLFPETKIADIKLG 533
Query: 112 HNRLDGVETIVSD 124
RL ++++
Sbjct: 534 RYRLSSPSGLLAE 546
>gi|238480786|ref|NP_001154245.1| unknown protein [Arabidopsis thaliana]
gi|332658452|gb|AEE83852.1| pleckstrin homology (PH) domain-containing protein [Arabidopsis
thaliana]
Length = 4218
Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 3 RKVNMEKLNFEQTKSVTYWAVGSKF--------VIPWDIKDPSRIHAEVGYSDGRVQELA 54
R V E + +Q ++W G K I + +D R++ +GY +G E +
Sbjct: 417 RSVQAENYSKKQQAKSSWWPFGGKSEVSGGEGESIQFTDEDWERLNKVIGYKEG--DEQS 474
Query: 55 ISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNL---VKEADLYPL 111
I + D L+ L V + ++++GEK+ E + + L K AD+
Sbjct: 475 IINNAKPDALHTFLEVQMKR-SASKLYDGEKECLAELSCEGLNCSVKLFPETKIADIKLG 533
Query: 112 HNRLDGVETIVSD 124
RL ++++
Sbjct: 534 RYRLSSPSGLLAE 546
>gi|240255963|ref|NP_193447.5| unknown protein [Arabidopsis thaliana]
gi|332658451|gb|AEE83851.1| pleckstrin homology (PH) domain-containing protein [Arabidopsis
thaliana]
Length = 4216
Score = 40.8 bits (94), Expect = 0.060, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Query: 3 RKVNMEKLNFEQTKSVTYWAVGSKF--------VIPWDIKDPSRIHAEVGYSDGRVQELA 54
R V E + +Q ++W G K I + +D R++ +GY +G E +
Sbjct: 417 RSVQAENYSKKQQAKSSWWPFGGKSEVSGGEGESIQFTDEDWERLNKVIGYKEG--DEQS 474
Query: 55 ISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNL---VKEADLYPL 111
I + D L+ L V + ++++GEK+ E + + L K AD+
Sbjct: 475 IINNAKPDALHTFLEVQMKR-SASKLYDGEKECLAELSCEGLNCSVKLFPETKIADIKLG 533
Query: 112 HNRLDGVETIVSD 124
RL ++++
Sbjct: 534 RYRLSSPSGLLAE 546
>gi|317120750|gb|ADV02572.1| hypothetical protein SC2_gp260 [Liberibacter phage SC2]
gi|317120764|gb|ADV02585.1| hypothetical protein SC2_gp260 [Candidatus Liberibacter asiaticus]
Length = 51
Score = 40.1 bits (92), Expect = 0.093, Method: Composition-based stats.
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 111 LHNRLDGVETIVSDLNNMKNRIQDL 135
+H RLDGVETIVSDLNNMKNRIQ+L
Sbjct: 1 MHTRLDGVETIVSDLNNMKNRIQEL 25
>gi|238922317|ref|YP_002935831.1| hypothetical protein EUBELI_20553 [Eubacterium eligens ATCC 27750]
gi|238873989|gb|ACR73697.1| Hypothetical protein EUBELI_20553 [Eubacterium eligens ATCC 27750]
Length = 951
Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 23/153 (15%)
Query: 1 MIRKVNMEKLNFEQTKSVTYWAVGSKFVIPWDIKDPSRIHAEVGYSDGRVQELAISQDFD 60
+I + NM + KS G ++ K+P+++ E + + ++ ++ + FD
Sbjct: 36 LIFQENMYQWQMSSNKS----RFGDWYICEKTTKEPNKVLDENDFLEKPLKAESMVRIFD 91
Query: 61 VDGLNALLTVNNREGDFI----------RIFEGEKQTFKEYNSDS---------PRAPHN 101
D N L V + DF+ R+ E + ++N+ + N
Sbjct: 92 SDWNNTKLYVGSMTDDFMKQGRIRLAEGRMPEASDEITMDWNTLLKLGYEGELGQKVTIN 151
Query: 102 LVKEADLYPLHNRLDGVETIVSDLNNMKNRIQD 134
+ ++ RL T+V LNN N QD
Sbjct: 152 YYENDNINSDKGRLSATFTLVGILNNYTNIWQD 184
>gi|222630238|gb|EEE62370.1| hypothetical protein OsJ_17159 [Oryza sativa Japonica Group]
Length = 691
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 49 RVQELAISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADL 108
R++EL D D L L+ N ++ D +R+ E E+Q + N HN KEA L
Sbjct: 395 RLEELTAQADSDKRNLEVLMQKNAKKADHLRLAELEQQK-ADGNVLRLVEEHNREKEATL 453
Query: 109 YP---LHNRLDGVETIVSDLNNMKNRIQ 133
LH +LD + + ++ ++K ++Q
Sbjct: 454 NSNMRLHEQLDRKQKLELEIAHLKGKLQ 481
>gi|298707584|emb|CBJ30163.1| similar to titin isoform N2-B [Ectocarpus siliculosus]
Length = 17422
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 9 KLNFEQTKSVTYWAVGSKFVIPWDIKDP--SRIHAEVGYSDGRVQELAIS-QD------- 58
+ E +++ + +G F W DP +R+ A+V +S + + + QD
Sbjct: 5268 EYELEVSEAKGFGLLGEYFNNRWTFGDPVVTRVDAKVDFSWSDTETITPTGQDYISARWT 5327
Query: 59 -FDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLV 103
F + D R++ G++ F ++ D R L+
Sbjct: 5328 GFVQPAFSERYVFTVEANDGARLWVGDRLMFDNFDEDLGRNDTGLM 5373
>gi|125550885|gb|EAY96594.1| hypothetical protein OsI_18500 [Oryza sativa Indica Group]
Length = 617
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 49 RVQELAISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADL 108
R++EL D D L L+ N ++ D +R+ E E+Q + N HN KEA L
Sbjct: 321 RLEELTAQADSDKRNLEVLMQKNAKKADHLRLAELEQQK-ADGNVLRLVEEHNREKEATL 379
Query: 109 YP---LHNRLDGVETIVSDLNNMKNRIQ 133
LH +LD + + ++ ++K ++Q
Sbjct: 380 NSNMRLHEQLDRKQKLELEIAHLKGKLQ 407
>gi|115462155|ref|NP_001054677.1| Os05g0153200 [Oryza sativa Japonica Group]
gi|52353592|gb|AAU44158.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113578228|dbj|BAF16591.1| Os05g0153200 [Oryza sativa Japonica Group]
Length = 617
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 49 RVQELAISQDFDVDGLNALLTVNNREGDFIRIFEGEKQTFKEYNSDSPRAPHNLVKEADL 108
R++EL D D L L+ N ++ D +R+ E E+Q + N HN KEA L
Sbjct: 321 RLEELTAQADSDKRNLEVLMQKNAKKADHLRLAELEQQK-ADGNVLRLVEEHNREKEATL 379
Query: 109 YP---LHNRLDGVETIVSDLNNMKNRIQ 133
LH +LD + + ++ ++K ++Q
Sbjct: 380 NSNMRLHEQLDRKQKLELEIAHLKGKLQ 407
>gi|301604165|ref|XP_002931736.1| PREDICTED: mixed lineage kinase domain-like protein-like [Xenopus
(Silurana) tropicalis]
Length = 490
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 51 QELAISQDFDVDGLNALLTVNNREG--DFIRIF---EGEKQTFKEYNSDSPRAPHNLVKE 105
+E A+ D D AL+ + + E +F++ F E +KQ FK D L E
Sbjct: 93 EEFALINDRLRDAAEALIMLTSVEHSQNFLKYFNEKEWKKQNFKAIEEDINDIKEYLKNE 152
Query: 106 AD-----LYPLHNRLDGVETIVSDLNNMKNRIQDL 135
D + + +++D V+ V D+ +R+++L
Sbjct: 153 LDSVAKKVVDVADKMDSVDNKVDDMATKMDRLEEL 187
>gi|319407369|emb|CBI81016.1| outer membrane protein [Bartonella sp. 1-1C]
Length = 798
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 24 GSKFVIPWDIKDPSRIHAEVGYSDGRVQ-------ELAISQDFDVDGLNALLTVNNREGD 76
G+K+V I+D RI A +S+G + EL + D ++ + L V +E +
Sbjct: 48 GNKYVAAQTIRDNMRIKAGRNFSEGDIDAEVKHLFELGLFYDIKINQIGNKLIVAVKEYE 107
Query: 77 FIR--IFEGEKQTFKE 90
+ +F+G K TFK+
Sbjct: 108 VVNQILFQGNK-TFKD 122
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.132 0.360
Lambda K H
0.267 0.0406 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,038,490,470
Number of Sequences: 14124377
Number of extensions: 35048937
Number of successful extensions: 107528
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 107496
Number of HSP's gapped (non-prelim): 47
length of query: 135
length of database: 4,842,793,630
effective HSP length: 100
effective length of query: 35
effective length of database: 3,430,355,930
effective search space: 120062457550
effective search space used: 120062457550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 75 (33.5 bits)