Additional argument should be provided in the following format:
[argument_name] [argument_value]

Accepted argument_names includes:
  -f  Threshold for extending hits [Integer]
    default = 11
  -m  alignment view options:
0 = pairwise,
1 = query-anchored showing identities,
2 = query-anchored no identities,
3 = flat query-anchored, show identities,
4 = flat query-anchored, no identities,
5 = query-anchored no identities and blunt ends,
6 = flat query-anchored, no identities and blunt ends,
7 = XML Blast output,
8 = Tabular output, 
9 = Tabular output with comments
10 = ASN, text
11 = ASN, binary [Integer]
    default = 0
  -y  Dropoff (X) for blast extensions in bits (default if zero) [Real]
    default = 7.0
  -P  0 for multiple hit, 1 for single hit [Integer]
    default = 0
  -G  Cost to open a gap [Integer]
    default = 11
  -E  Cost to extend a gap [Integer]
    default = 1
  -X  X dropoff value for gapped alignment (in bits) [Integer]
    default = 15
  -N  Number of bits to trigger gapping [Real]
    default = 22.0
  -h  e-value threshold for inclusion in multipass model [Real]
    default = 0.002
  -c  Constant in pseudocounts for multipass version; 0 uses entropy method; otherwise a value near 30 is recommended [Integer]
    default = 0
  -j  Maximum number of passes to use in  multipass version [Integer]
    default = 1
  -J  Believe the query defline [T/F]
    default = F
  -Z  X dropoff value for final gapped alignment (in bits) [Integer]
    default = 25
  -O  SeqAlign file ('Believe the query defline' must be TRUE) [File Out]  Optional
  -M  Matrix [String]
    default = BLOSUM62
  -W  Word size [Integer]
    default = 3
  -z  Effective length of the database (use zero for the real size) [Real]
    default = 0
  -K  Number of best hits from a region to keep [Integer]
    default = 0
  -s  Compute locally optimal Smith-Waterman alignments [T/F]
    default = F
  -Y  Effective length of the search space (use zero for the real size) [Real]
    default = 0
  -U  Use lower case filtering of FASTA sequence [T/F]  Optional
    default = F
  -t  Use composition based score adjustment
As first character:
0 or F or f: no composition-based statistics
2 or T or t: Composition-based score adjustment as in Bioinformatics 21:902-911, 2005, conditioned on sequence properties in round 1
1: Composition-based statistics as in NAR  29:2994--3005, 2001
3: Composition-based score adjustment as in Bioinformatics 21:902-911, 2005, unconditionally in round 1
As second character, if first character is equivalent to 1, 2, or 3:
U or u: unified p-value combining alignment p-value and compositional p-value in round 1 only
 [String]
    default = 2
  -L  Cost to decline alignment (disabled when 0) [Integer]
    default = 0