RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= 537021.9.peg.1064_1 (238 letters) >d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Score = 27.0 bits (59), Expect = 1.5 Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 1/48 (2%) Query: 82 IHNRQN-INNLLLSDLLTQRIQDLLPHHHTHVNTTKDFPPQQLRDNDV 128 I + ++ D + T+VN P L+ + Sbjct: 42 IREQHCLFRSIPQPDGEVVVTLEPCEGAETYVNGKLVTEPLVLKSGNR 89 >d2j8ga2 c.1.8.8 (A:2-190) N-terminal domain of endolysin {Bacteriophage cp-1 [TaxId: 10747]} Length = 189 Score = 26.6 bits (58), Expect = 2.0 Identities = 10/36 (27%), Positives = 12/36 (33%) Query: 22 ANLANASANAYRENIDRMTPDGIWQYKTSGVDKIID 57 A A E M WQY ++ DK I Sbjct: 150 AGYGLNDGTANFEYFPSMDGIRWWQYSSNPFDKNIV 185 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.314 0.130 0.369 Gapped Lambda K H 0.267 0.0603 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 834,623 Number of extensions: 36947 Number of successful extensions: 85 Number of sequences better than 10.0: 1 Number of HSP's gapped: 85 Number of HSP's successfully gapped: 14 Length of query: 238 Length of database: 2,407,596 Length adjustment: 83 Effective length of query: 155 Effective length of database: 1,268,006 Effective search space: 196540930 Effective search space used: 196540930 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 51 (23.7 bits)