BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.1073_1
         (162 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|315122533|ref|YP_004063022.1| hypothetical protein CKC_03925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495935|gb|ADR52534.1| hypothetical protein CKC_03925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 331

 Score =  300 bits (767), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 141/161 (87%), Positives = 148/161 (91%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           MTKKAKDG QR F+KQ+LD VMQEGYQNG NFRHI+VSPYVKSEFVRFMSDSNVASFRYA
Sbjct: 170 MTKKAKDGAQRPFTKQLLDAVMQEGYQNGANFRHIVVSPYVKSEFVRFMSDSNVASFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S  S NNTIVATADIYD PFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR I E
Sbjct: 230 VSDNSKNNTIVATADIYDGPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRNIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKT 161
           DKNIAK GDANKGVLIGEG LKV+NEKA+GV++DLFGLSKT
Sbjct: 290 DKNIAKTGDANKGVLIGEGTLKVKNEKAIGVISDLFGLSKT 330


>gi|227822441|ref|YP_002826413.1| putative phage major head protein [Sinorhizobium fredii NGR234]
 gi|227341442|gb|ACP25660.1| putative phage major head protein [Sinorhizobium fredii NGR234]
          Length = 331

 Score =  233 bits (593), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 109/162 (67%), Positives = 124/162 (76%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +T    DGTQR F+K ILD VMQ+GYQNG NFRH+ VSPYVKS FV FMSDSNVA FRYA
Sbjct: 170 LTVAPTDGTQRPFTKAILDTVMQQGYQNGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S     NTIVATAD Y+ PFG VM+HPNRV A N   ARNAF ID +ML FLWLR I E
Sbjct: 230 VSQGGERNTIVATADYYEGPFGTVMIHPNRVQAVNGGVARNAFFIDSDMLSFLWLRQIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKTT 162
           D+++AK GDA+KGV+IGEG LKV NE+ +GV ADLFGLS  +
Sbjct: 290 DRDVAKTGDADKGVIIGEGTLKVHNERGLGVAADLFGLSSAS 331


>gi|150397033|ref|YP_001327500.1| hypothetical protein Smed_1830 [Sinorhizobium medicae WSM419]
 gi|150028548|gb|ABR60665.1| hypothetical protein Smed_1830 [Sinorhizobium medicae WSM419]
          Length = 331

 Score =  226 bits (576), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 110/160 (68%), Positives = 126/160 (78%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +T    DG QR F+K ILD VMQ GYQ+G NFRH+ VSPYVKS FV FMSDSNVA FRYA
Sbjct: 170 LTVAPTDGEQRAFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S     NTIVATAD Y+ PFG VM+HPNRV A+ A TARNAF +D +MLEFLWLR I E
Sbjct: 230 VSQGGERNTIVATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSK 160
           DK++AK GDA+KGV+IGEG LKV+NEK +GV ADLFGLS+
Sbjct: 290 DKDVAKTGDADKGVIIGEGTLKVKNEKGLGVAADLFGLSE 329


>gi|227821704|ref|YP_002825674.1| putative phage related protein [Sinorhizobium fredii NGR234]
 gi|227340703|gb|ACP24921.1| putative phage related protein [Sinorhizobium fredii NGR234]
          Length = 123

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 86/111 (77%)

Query: 25  GYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKV 84
           GYQNG NFRH+  SPYVKS FV FMSDSNVA FRYA S     NTIVATAD Y+ PFG V
Sbjct: 6   GYQNGANFRHVSASPYVKSVFVTFMSDSNVAPFRYAVSKGGERNTIVATADYYEGPFGTV 65

Query: 85  MVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVL 135
           M+HPNRV A+ A  ARNAF ID +ML FLWLR I EDK++AK GDA+KGV+
Sbjct: 66  MIHPNRVQATGATQARNAFFIDTDMLSFLWLRKIQEDKDVAKTGDADKGVI 116


>gi|160897389|ref|YP_001562971.1| putative phage major head protein [Delftia acidovorans SPH-1]
 gi|160362973|gb|ABX34586.1| putative phage major head protein [Delftia acidovorans SPH-1]
          Length = 306

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GTQR F +  + +V+Q+ Y  G     I++ P  K  F  F  ++           KS +
Sbjct: 171 GTQRAFVESQVKDVLQKCYTAGGEPDTIMMPPAAKQTFSTFTGNATRMD-------KSED 223

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           + + A+ D Y   FG +   PNR MA+     R+ FL+  + L   +LR   +  +IAK 
Sbjct: 224 SKLYASVDYYVSDFGTIQAVPNRFMAT-----RDVFLLQSDKLAVAYLRPF-QTTDIAKT 277

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADLF 156
           GD++   +I E  L+ R  KA G V D+ 
Sbjct: 278 GDSDAQQIIVEYTLECRAPKAHGAVYDIL 306


>gi|221199511|ref|ZP_03572555.1| major head protein [Burkholderia multivorans CGD2M]
 gi|221205587|ref|ZP_03578602.1| major head protein [Burkholderia multivorans CGD2]
 gi|221174425|gb|EEE06857.1| major head protein [Burkholderia multivorans CGD2]
 gi|221180796|gb|EEE13199.1| major head protein [Burkholderia multivorans CGD2M]
          Length = 317

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 6/148 (4%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GT R F++ +L E ++  Y+ G N   + + P  K     F  +   A+   + +G    
Sbjct: 174 GTARPFTEDLLKEALRLAYEAGGNVTQVHMRPVDKQRASGFAGN---ATRMESVNGTGKT 230

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
             +  +  IY   FG V + PNRVM++  +TA   + IDP+M     LR   E + +AK 
Sbjct: 231 AVLQTSYSIYASDFGNVAMIPNRVMSAVNDTA--VYAIDPSMWALATLRGF-EKEELAKV 287

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
           GDA    +  EG L+ RNE +   + DL
Sbjct: 288 GDARNWQITWEGTLEARNEASSAQIRDL 315


>gi|291334595|gb|ADD94245.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S04-C136]
          Length = 316

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 12/153 (7%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSH 66
           DGTQR F++  L  ++   Y  G N   I+V+ + K +   F   S     R+     + 
Sbjct: 169 DGTQRAFTEDQLKGILVSCYNEGGNPNMIMVNAFNKQKLSGFTGGST----RF---DAAE 221

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVM----ASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
           +  ++ + D+Y+  FG + V PNR +     + A+  ++A ++D       +LR     +
Sbjct: 222 DRRLITSIDVYESDFGTMQVSPNRFIRGANGTAAKIGQDAHILDMEYWAVSFLRDFAL-Q 280

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
             A+  DA++  ++ E  L+ RNEKA G++ DL
Sbjct: 281 TPAQTADADQRFMVAEYTLESRNEKASGLITDL 313


>gi|288817864|ref|YP_003432211.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
 gi|288787263|dbj|BAI69010.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751463|gb|ADO44946.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
          Length = 291

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 17/153 (11%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG- 63
           A  G+ R  ++ +L++ +Q+ +Q G N   ++VS   K           V+SF    +  
Sbjct: 153 ANGGSPRALTETLLNDGIQQAWQAGGNPDVVVVSGKNKR---------TVSSFTAGVTKT 203

Query: 64  -KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
             + +  +V+T D+Y+  FG V +  +R M  +       F+++    +  +LR   + +
Sbjct: 204 VAAEDKKLVSTVDVYESDFGLVRIVADRWMPDS-----KVFILEKGRFKIAYLRPFKQ-Q 257

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            IAK GD  + V++GE  L+VR EKA  ++AD+
Sbjct: 258 EIAKVGDRIERVVVGELTLEVRAEKANAIIADI 290


>gi|283856246|ref|YP_162122.2| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|283775241|gb|AAV89011.2| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 304

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 11/154 (7%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T  A  G  R +++ +L EV+ + + +G     +I S  +K     F     +AS R  T
Sbjct: 159 TTAATTGKARLYTEALLKEVLGDIWVSGGQPNMVITSLKLKQTAAAF---PGLASNRRDT 215

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
             +     I+A ADIY    G+V   P+R   +++     A +IDP       L  I + 
Sbjct: 216 GDQKAR--IIAGADIYVSDVGEVQFVPDRFCDNSS-----ALVIDPEYWSVATLDPIQK- 267

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +++A  G A++  L  E AL+  NE A GV+ADL
Sbjct: 268 RSLATTGLADRDALYTEIALRCHNEAASGVLADL 301


>gi|163783849|ref|ZP_02178828.1| hypothetical protein HG1285_12862 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880872|gb|EDP74397.1| hypothetical protein HG1285_12862 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 291

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGK 64
           A  GT R  ++ +L++ +Q+ +Q G N   ++V+   K     F      A      + K
Sbjct: 153 ANAGTPRPLTETLLNDGLQQAWQTGGNPDVVVVNGTNKRTISGF-----TAGLTKEIAAK 207

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNI 124
             +  ++A+ D+Y+  FG V V  NR M ++       F+++    +  +L   H+++ +
Sbjct: 208 --DKRLIASVDVYESDFGLVRVIANRWMPAD-----KVFILEKGRWKVAYLDPFHQEE-L 259

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +K GD  + V++GE  L+ R EKA  ++ D+
Sbjct: 260 SKVGDRKERVVVGELTLEGRAEKANAIITDI 290


>gi|241760939|ref|ZP_04759028.1| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374558|gb|EER64019.1| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 238

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T  A  G  R +++ +L EV+ + + +G     +I S  +K     F     +AS R  T
Sbjct: 93  TTAATAGKARLYTEALLKEVLGDIWVSGGQPNMVITSLKLKQTAAAF---PGLASNRRDT 149

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
                   I+A ADIY    G+V   P+R   ++     +A +IDP       L  I + 
Sbjct: 150 G--DQKARIIAGADIYVSDVGEVQFVPDRFCDNS-----SALVIDPEYWSVATLDPIQK- 201

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +++A  G A++  L  E AL+  NE   GV+ADL
Sbjct: 202 RSLATTGLADRDALYTEIALRCHNEATSGVLADL 235


>gi|167600435|ref|YP_001671935.1| major head protein [Pseudomonas phage LUZ24]
 gi|161168298|emb|CAP45463.1| major head protein [Pseudomonas phage LUZ24]
          Length = 317

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           G  R  ++ +L    +  ++NG     I  S  +K    +     N+       +  + +
Sbjct: 177 GDLRLLTEDMLLNASEAIWRNGGQANSIQTSSSIKKAISK-----NMKGRATEITLDASD 231

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N I  T D+Y+  FGK  +  NR    N       F+ DP M    +LR   + + +AK 
Sbjct: 232 NRIAQTVDVYESDFGKYTIRANRWFHENT-----MFIFDPKMHALCYLRPFFQHE-LAKT 285

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
           GD+ K  L+ E  L+V NEK+  ++ D+
Sbjct: 286 GDSEKRQLLVEYTLRVNNEKSGALIRDV 313


>gi|291334838|gb|ADD94478.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S06-C1041]
          Length = 323

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFR-YATSGKSH 66
           GT  TF +  L  V+++ + NG +   I+   + K     F        FR    SG   
Sbjct: 180 GTAATFVEADLKSVVKQCWDNGGDPGVIMTGSFNKQAASGFAGIGT--QFRDVQPSGPVS 237

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAK 126
             +IV  ADIY   FG+  +  NR M      A N + +D       +LR I  + ++ K
Sbjct: 238 PGSIVGAADIYISDFGQHQIVANRFMP-----AANVYALDMEYWCVAYLRPIQTE-DLGK 291

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVV 152
            GD+++ +LI E  L  +NE A G +
Sbjct: 292 TGDSDRRMLISEYTLGSKNEAASGKI 317


>gi|291334638|gb|ADD94286.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S04-C64]
          Length = 323

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFR-YATSGKSH 66
           GT  TF +  L  V+++ + NG +   I+   + K     F        FR    SG   
Sbjct: 180 GTAATFVEADLKSVVKQCWDNGGDPGVIMTGSFNKQAASGFAGIGT--QFRDVQPSGPVS 237

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAK 126
             +IV  ADIY   FG+  +  NR M      A N + +D       +LR I  + ++ K
Sbjct: 238 PGSIVGAADIYISDFGQHQIVANRFMP-----AANVYALDMEYWCVAYLRPIQTE-DLGK 291

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVV 152
            GD+++ +LI E  L  +NE A G +
Sbjct: 292 TGDSDRRMLISEYTLGSKNEAASGKI 317


>gi|27476049|ref|NP_775251.1| major head protein [Pseudomonas phage PaP3]
 gi|27414479|gb|AAL85565.1| major head protein [Pseudomonas phage PaP3]
          Length = 317

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           G  R  ++ +L    +  ++NG     I  S  +K    +     N+       +  + +
Sbjct: 177 GDLRLLTEDMLLNASESIWRNGGQANSIQTSSSIKKAISK-----NMKGRATEITLDASD 231

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N I  T D+Y+  FGK  +  NR    N       F+ DP M    +LR   + + +AK 
Sbjct: 232 NRIAQTVDVYESDFGKYTIRANRWFHENT-----LFVFDPKMHSLCYLRPFFQHE-LAKT 285

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
           GD+ K  L+ E   +V NEK+  ++ D+
Sbjct: 286 GDSEKRQLLVEYTFRVNNEKSGALIRDV 313


>gi|148257053|ref|YP_001241638.1| putative phage major head protein [Bradyrhizobium sp. BTAi1]
 gi|146409226|gb|ABQ37732.1| putative phage Major head protein [Bradyrhizobium sp. BTAi1]
          Length = 320

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 21/153 (13%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSH 66
           DGTQ  F++  L  V+   + NG     I+   + K  F  F   S           ++ 
Sbjct: 180 DGTQIAFTEARLKTVLSSIWINGGKPGTILTGAFNKQVFSTFTGRSTAIE-------EAK 232

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN--- 123
           +  IVA+ D Y+  FGK+     +V+AS  + AR+  +++ +     W       +N   
Sbjct: 233 SKKIVASVDAYESDFGKL-----KVVASRFQRARDVLVLEMDK----WAVAYLNGRNMIS 283

Query: 124 --IAKNGDANKGVLIGEGALKVRNEKAVGVVAD 154
             +AK GD+++  ++ E AL  RNEKA G + D
Sbjct: 284 IPLAKTGDSDRRQILAEYALVARNEKASGGIFD 316


>gi|291334405|gb|ADD94061.1| major head protein [uncultured phage MedDCM-OCT-S01-C1]
          Length = 344

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS--GK 64
           DG   +F  Q + + +Q  Y+ G    H++ +P V      +M D N A     TS  G 
Sbjct: 188 DGVALSF--QAVKDAIQGVYEQGGEVTHLMSNPGVIGALSSYMFD-NEARVATLTSDQGA 244

Query: 65  SHNN--TIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
             N+  T +++ ++    FG + + PNR+    A     AFL+DP  +   +L     D 
Sbjct: 245 PANSKATALSSVNVLVSDFGTIKLVPNRLQPLAANGTAVAFLLDPEYVSLSYLEGYRTD- 303

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK G A K  +  +  L+V  EKA G++ ++
Sbjct: 304 TLAKTGLAEKRQISVDWGLRVHTEKAHGMLVNI 336


>gi|294083943|ref|YP_003550700.1| major head protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663515|gb|ADE38616.1| major head protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 133

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 21/143 (14%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN-----NTIVA 72
           L +  Q  Y  G +    ++ P          SDS + +    +SG++ N      T+V 
Sbjct: 6   LLDAHQAAYTAGADVSVFMIKP----------SDSEIVAGFTGSSGRTRNFNDGTTTLVN 55

Query: 73  TADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANK 132
             D+   P+G + V  NR      +   +AFL+DP+M     LR +     ++K GD++K
Sbjct: 56  AVDVMINPYGTLKVVLNR-----HQLTTHAFLLDPSMWRSAVLRPVSRTL-LSKTGDSDK 109

Query: 133 GVLIGEGALKVRNEKAVGVVADL 155
              + EG L+  N+    ++  L
Sbjct: 110 HFCVYEGGLQHLNQSGSAMITGL 132


>gi|316934287|ref|YP_004109269.1| putative phage major head protein [Rhodopseudomonas palustris DX-1]
 gi|315602001|gb|ADU44536.1| putative phage major head protein [Rhodopseudomonas palustris DX-1]
          Length = 304

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 14/91 (15%)

Query: 70  IVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN-----I 124
           IV   ++Y  PFG+      +++ S    A +  L DP M    W R I + +N     +
Sbjct: 218 IVNAVNLYVSPFGE-----EKIVLSRHLKAGDTLLFDPAM----WARVILQGRNWFRETL 268

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           AK GD+ K +++GE  LK +N+KA  +V ++
Sbjct: 269 AKTGDSLKMMIVGEFGLKHKNQKASALVREM 299


>gi|196048420|ref|ZP_03115595.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196020677|gb|EDX59409.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 312

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N I  TAD+    +G+  +  NR M   A T     ++D N ++   LR +  +  +AKN
Sbjct: 217 NIIGLTADVIHTRYGRGNIVLNRHMPDGALT-----IVDLNQVKLRPLRKMLAEP-LAKN 270

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADLFG 157
           GD+ K +++GE +L+++N  A  V+  + G
Sbjct: 271 GDSQKRMIVGEYSLELKNSYAGAVINGITG 300


>gi|307308932|ref|ZP_07588615.1| putative phage major head protein [Sinorhizobium meliloti BL225C]
 gi|306900566|gb|EFN31179.1| putative phage major head protein [Sinorhizobium meliloti BL225C]
          Length = 309

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSH 66
           DGT R  S  ++ E M EG  +      I++ P  + + +  +S+     F+ A+     
Sbjct: 173 DGTARALSHALIVE-MAEGIHSEGGVPKILLVPPAQKKNIVALSNGTT-KFQDAS----- 225

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE---DKN 123
             T+     +Y+ PFG+  +  +R + S+          DP     LW + +      K 
Sbjct: 226 KKTVFGDVTMYETPFGRFDIVTSRDVRSS-----TVIGYDPE----LWAQAVFRGLTKKK 276

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           + + GD     +I E  L  RNE   G VADL
Sbjct: 277 LPEGGDYEGYQVITEVTLVCRNEAGNGKVADL 308


>gi|281417131|ref|ZP_06248151.1| conserved hypothetical protein [Clostridium thermocellum JW20]
 gi|281408533|gb|EFB38791.1| conserved hypothetical protein [Clostridium thermocellum JW20]
          Length = 292

 Score = 37.4 bits (85), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 81  FGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGA 140
           +G V V  NR M  +        ++DP  L  ++LR    +  +AK+GD  KG++I E  
Sbjct: 226 YGIVNVVLNRHMPVD-----KILVVDPTYLRLVYLRKPSFEM-LAKDGDNLKGMVITELT 279

Query: 141 LKVRNEKAVGV 151
           LK+ N KAV V
Sbjct: 280 LKLLNSKAVAV 290


>gi|90579438|ref|ZP_01235248.1| hypothetical protein VAS14_07013 [Vibrio angustum S14]
 gi|90440271|gb|EAS65452.1| hypothetical protein VAS14_07013 [Vibrio angustum S14]
          Length = 424

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 12/114 (10%)

Query: 52  SNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVH----PNRVMASNAETARNAFLIDP 107
           +N+A+ R     KS++  ++   D+Y  P  +   +    P+ VM +  ET  +  + DP
Sbjct: 175 ANLATMRALLGNKSNSEHLMVMLDLYHLPERENKFNQNPFPHYVMLTETETPEHWMMWDP 234

Query: 108 NMLEFLWLRTIHEDK--NIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLS 159
           +   F W   I +D+  N         G +  E AL   ++  + VV D F L 
Sbjct: 235 D---FRWQGEISQDRIENAISQPTVEGGYIFNENAL---HDAPLNVVQDYFKLC 282


>gi|89072638|ref|ZP_01159203.1| hypothetical protein SKA34_18949 [Photobacterium sp. SKA34]
 gi|89051458|gb|EAR56912.1| hypothetical protein SKA34_18949 [Photobacterium sp. SKA34]
          Length = 424

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 14/115 (12%)

Query: 52  SNVASFRYATSGKSHNNTIVATADIYDRP-----FGKVMVHPNRVMASNAETARNAFLID 106
           +N+AS R   + KS+ + ++   D+Y  P     F +    P+ VM +   T  +  + D
Sbjct: 175 ANLASMRALLNNKSNQDHLMVMLDLYHLPERENKFNQNPF-PHYVMLTETSTPEHWLMWD 233

Query: 107 PNMLEFLWLRTIHEDK--NIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLS 159
           P+   F W   I +D+  N         G +  E AL   ++  + VV D F L 
Sbjct: 234 PD---FRWQGEISQDRIENAISQPTVEGGYIFNENAL---HDAPLNVVQDYFKLC 282


>gi|165973117|gb|ABY76238.1| EagI restriction endonuclease [Pantoea agglomerans]
          Length = 301

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAET----ARNAFLIDPNML---EFLWLRT 117
           +H+ TI+        P+G V++ PNR+ A++ ET    +R+AF  D   L    F+  R 
Sbjct: 42  NHDQTIIYGTCSVTSPYGDVIICPNRLYANDYETLHKVSRDAFGDDVPFLTYSNFIKYRA 101

Query: 118 IHEDKNIAKNGDANKGVLIG 137
            ++D  +A   ++ K V +G
Sbjct: 102 TYKDCIVALGKNSGKEVQVG 121


>gi|292669402|ref|ZP_06602828.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648963|gb|EFF66935.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 602

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 8/75 (10%)

Query: 41  VKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETAR 100
           VKS F +F SD    + + A   K+ +  +V    + D+P     V    +     E  R
Sbjct: 370 VKSPFKKFYSDETFETIKNAVGAKTGDLLLV----VADQP----AVVAQALGELRLEMGR 421

Query: 101 NAFLIDPNMLEFLWL 115
              LIDPN L FLW+
Sbjct: 422 RRNLIDPNALSFLWV 436


>gi|229187822|ref|ZP_04314947.1| hypothetical protein bcere0004_53480 [Bacillus cereus BGSC 6E1]
 gi|228595657|gb|EEK53352.1| hypothetical protein bcere0004_53480 [Bacillus cereus BGSC 6E1]
          Length = 313

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 73  TADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANK 132
           T D+    +G+  +  NR M   A T     ++D N  +   LR +   K ++K GD++K
Sbjct: 222 TVDVIHTRYGRGNIVLNRHMPDGALT-----IVDLNQTKLRPLRKMAAQK-LSKIGDSDK 275

Query: 133 GVLIGEGALKVRNEKAVGVVADLFGL 158
            +++GE +L+++N  A  V++ + G+
Sbjct: 276 QMIVGEYSLELKNSYAGAVISGITGI 301


>gi|114566839|ref|YP_753993.1| hypothetical protein Swol_1314 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337774|gb|ABI68622.1| hypothetical protein Swol_1314 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 398

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 81  FGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGA 140
           +G + +  NR M ++        + DP  ++  +LR  H +  +AK GD+  G +I E  
Sbjct: 223 YGTIKLVLNRHMPTD-----KMVVFDPAFVKISYLRQPHFEL-LAKTGDSINGHVIAEMT 276

Query: 141 LKVRNEKAVGV 151
           LK+ N+KA+ V
Sbjct: 277 LKMLNQKAIAV 287


>gi|238926284|ref|ZP_04658044.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885964|gb|EEQ49602.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 598

 Score = 34.3 bits (77), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 41  VKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETAR 100
           VKS F +F SD    + + A   K+ +  +V    + D+P    +V    +     E  R
Sbjct: 370 VKSPFKKFYSDETFETIKNAVGAKTGDLLLV----VADQP----LVVAQALGELRLEMGR 421

Query: 101 NAFLIDPNMLEFLWL 115
              LIDP+ L FLW+
Sbjct: 422 RRGLIDPDALRFLWV 436


>gi|304437074|ref|ZP_07397037.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370025|gb|EFM23687.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 602

 Score = 34.3 bits (77), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 41  VKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETAR 100
           VKS F +F SD    + + A   K+ +  +V    + D+P    +V    +     E  R
Sbjct: 370 VKSPFKKFYSDETFETIKNAVGAKTGDLLLV----VADQP----LVVAQALGELRLEMGR 421

Query: 101 NAFLIDPNMLEFLWL 115
              LIDP+ L FLW+
Sbjct: 422 RRGLIDPDALRFLWV 436


>gi|228470849|ref|ZP_04055696.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis
           60-3]
 gi|228307416|gb|EEK16426.1| signal peptide peptidase SppA, 67K type [Porphyromonas uenonis
           60-3]
          Length = 594

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 107 PNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGALKVR 144
           P+ L F+ LR ++  ++ A++G+AN GVL  EG + V 
Sbjct: 286 PDDLYFVSLRDVYATRSSARSGEANIGVLFAEGEINVE 323


>gi|303327249|ref|ZP_07357691.1| succinate-semialdehyde dehydrogenase [NAD(P)+] [Desulfovibrio sp.
           3_1_syn3]
 gi|302863237|gb|EFL86169.1| succinate-semialdehyde dehydrogenase [NAD(P)+] [Desulfovibrio sp.
           3_1_syn3]
          Length = 478

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 57  FRYATSGKSHNNTIVATADIYDRPFGKVMVH-PNRVMASNAETARN 101
           F YATS  S  N ++A AD+Y+R   +++ H  + V  +N ET RN
Sbjct: 249 FDYATSCSS-ENAVIAVADVYERFMEEMLAHGCHLVSGANRETLRN 293


Searching..................................................done


Results from round 2




>gi|315122533|ref|YP_004063022.1| hypothetical protein CKC_03925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495935|gb|ADR52534.1| hypothetical protein CKC_03925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 331

 Score =  224 bits (570), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 141/161 (87%), Positives = 148/161 (91%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           MTKKAKDG QR F+KQ+LD VMQEGYQNG NFRHI+VSPYVKSEFVRFMSDSNVASFRYA
Sbjct: 170 MTKKAKDGAQRPFTKQLLDAVMQEGYQNGANFRHIVVSPYVKSEFVRFMSDSNVASFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S  S NNTIVATADIYD PFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR I E
Sbjct: 230 VSDNSKNNTIVATADIYDGPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRNIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKT 161
           DKNIAK GDANKGVLIGEG LKV+NEKA+GV++DLFGLSKT
Sbjct: 290 DKNIAKTGDANKGVLIGEGTLKVKNEKAIGVISDLFGLSKT 330


>gi|227822441|ref|YP_002826413.1| putative phage major head protein [Sinorhizobium fredii NGR234]
 gi|227341442|gb|ACP25660.1| putative phage major head protein [Sinorhizobium fredii NGR234]
          Length = 331

 Score =  221 bits (562), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 109/162 (67%), Positives = 124/162 (76%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +T    DGTQR F+K ILD VMQ+GYQNG NFRH+ VSPYVKS FV FMSDSNVA FRYA
Sbjct: 170 LTVAPTDGTQRPFTKAILDTVMQQGYQNGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S     NTIVATAD Y+ PFG VM+HPNRV A N   ARNAF ID +ML FLWLR I E
Sbjct: 230 VSQGGERNTIVATADYYEGPFGTVMIHPNRVQAVNGGVARNAFFIDSDMLSFLWLRQIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKTT 162
           D+++AK GDA+KGV+IGEG LKV NE+ +GV ADLFGLS  +
Sbjct: 290 DRDVAKTGDADKGVIIGEGTLKVHNERGLGVAADLFGLSSAS 331


>gi|150397033|ref|YP_001327500.1| hypothetical protein Smed_1830 [Sinorhizobium medicae WSM419]
 gi|150028548|gb|ABR60665.1| hypothetical protein Smed_1830 [Sinorhizobium medicae WSM419]
          Length = 331

 Score =  213 bits (542), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 110/161 (68%), Positives = 126/161 (78%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +T    DG QR F+K ILD VMQ GYQ+G NFRH+ VSPYVKS FV FMSDSNVA FRYA
Sbjct: 170 LTVAPTDGEQRAFTKSILDSVMQAGYQSGANFRHVSVSPYVKSVFVTFMSDSNVAPFRYA 229

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
            S     NTIVATAD Y+ PFG VM+HPNRV A+ A TARNAF +D +MLEFLWLR I E
Sbjct: 230 VSQGGERNTIVATADYYEGPFGTVMIHPNRVQAATAATARNAFFLDTDMLEFLWLRKIQE 289

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKT 161
           DK++AK GDA+KGV+IGEG LKV+NEK +GV ADLFGLS+ 
Sbjct: 290 DKDVAKTGDADKGVIIGEGTLKVKNEKGLGVAADLFGLSEA 330


>gi|291334595|gb|ADD94245.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S04-C136]
          Length = 316

 Score =  166 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 12/154 (7%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKS 65
            DGTQR F++  L  ++   Y  G N   I+V+ + K +   F   S            +
Sbjct: 168 TDGTQRAFTEDQLKGILVSCYNEGGNPNMIMVNAFNKQKLSGFTGGSTRF-------DAA 220

Query: 66  HNNTIVATADIYDRPFGKVMVHPNRVM----ASNAETARNAFLIDPNMLEFLWLRTIHED 121
            +  ++ + D+Y+  FG + V PNR +     + A+  ++A ++D       +LR     
Sbjct: 221 EDRRLITSIDVYESDFGTMQVSPNRFIRGANGTAAKIGQDAHILDMEYWAVSFLRDFAL- 279

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +  A+  DA++  ++ E  L+ RNEKA G++ DL
Sbjct: 280 QTPAQTADADQRFMVAEYTLESRNEKASGLITDL 313


>gi|160897389|ref|YP_001562971.1| putative phage major head protein [Delftia acidovorans SPH-1]
 gi|160362973|gb|ABX34586.1| putative phage major head protein [Delftia acidovorans SPH-1]
          Length = 306

 Score =  162 bits (410), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
                GTQR F +  + +V+Q+ Y  G     I++ P  K  F  F  ++          
Sbjct: 166 TGYTPGTQRAFVESQVKDVLQKCYTAGGEPDTIMMPPAAKQTFSTFTGNATRM------- 218

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
            KS ++ + A+ D Y   FG +   PNR MA      R+ FL+  + L   +LR      
Sbjct: 219 DKSEDSKLYASVDYYVSDFGTIQAVPNRFMA-----TRDVFLLQSDKLAVAYLRPFQTT- 272

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADLF 156
           +IAK GD++   +I E  L+ R  KA G V D+ 
Sbjct: 273 DIAKTGDSDAQQIIVEYTLECRAPKAHGAVYDIL 306


>gi|163783849|ref|ZP_02178828.1| hypothetical protein HG1285_12862 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880872|gb|EDP74397.1| hypothetical protein HG1285_12862 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 291

 Score =  159 bits (402), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGK 64
           A  GT R  ++ +L++ +Q+ +Q G N   ++V+   K     F +              
Sbjct: 153 ANAGTPRPLTETLLNDGLQQAWQTGGNPDVVVVNGTNKRTISGFTAGLTK-------EIA 205

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNI 124
           + +  ++A+ D+Y+  FG V V  NR M ++       F+++    +  +L   H+ + +
Sbjct: 206 AKDKRLIASVDVYESDFGLVRVIANRWMPAD-----KVFILEKGRWKVAYLDPFHQ-EEL 259

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +K GD  + V++GE  L+ R EKA  ++ D+
Sbjct: 260 SKVGDRKERVVVGELTLEGRAEKANAIITDI 290


>gi|291334838|gb|ADD94478.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S06-C1041]
          Length = 323

 Score =  158 bits (400), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T     GT  TF +  L  V+++ + NG +   I+   + K     F             
Sbjct: 174 TTDPTAGTAATFVEADLKSVVKQCWDNGGDPGVIMTGSFNKQAASGFAGIGTQF-RDVQP 232

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
           SG     +IV  ADIY   FG+  +  NR M      A N + +D       +LR I   
Sbjct: 233 SGPVSPGSIVGAADIYISDFGQHQIVANRFMP-----AANVYALDMEYWCVAYLRPIQ-T 286

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVA 153
           +++ K GD+++ +LI E  L  +NE A G + 
Sbjct: 287 EDLGKTGDSDRRMLISEYTLGSKNEAASGKIY 318


>gi|291334638|gb|ADD94286.1| putative phage major head protein [uncultured phage
           MedDCM-OCT-S04-C64]
          Length = 323

 Score =  157 bits (397), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 7/152 (4%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           +     GT  TF +  L  V+++ + NG +   I+   + K     F             
Sbjct: 174 STDPTAGTAATFVEADLKSVVKQCWDNGGDPGVIMTGSFNKQAASGFAGIGTQF-RDVQP 232

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
           SG     +IV  ADIY   FG+  +  NR M      A N + +D       +LR I   
Sbjct: 233 SGPVSPGSIVGAADIYISDFGQHQIVANRFMP-----AANVYALDMEYWCVAYLRPIQ-T 286

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVA 153
           +++ K GD+++ +LI E  L  +NE A G + 
Sbjct: 287 EDLGKTGDSDRRMLISEYTLGSKNEAASGKIY 318


>gi|221199511|ref|ZP_03572555.1| major head protein [Burkholderia multivorans CGD2M]
 gi|221205587|ref|ZP_03578602.1| major head protein [Burkholderia multivorans CGD2]
 gi|221174425|gb|EEE06857.1| major head protein [Burkholderia multivorans CGD2]
 gi|221180796|gb|EEE13199.1| major head protein [Burkholderia multivorans CGD2M]
          Length = 317

 Score =  155 bits (391), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 6/153 (3%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
                GT R F++ +L E ++  Y+ G N   + + P  K     F  +   A+   + +
Sbjct: 169 TPPVAGTARPFTEDLLKEALRLAYEAGGNVTQVHMRPVDKQRASGFAGN---ATRMESVN 225

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
           G      +  +  IY   FG V + PNRVM++  +TA   + IDP+M     LR   E +
Sbjct: 226 GTGKTAVLQTSYSIYASDFGNVAMIPNRVMSAVNDTA--VYAIDPSMWALATLRGF-EKE 282

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK GDA    +  EG L+ RNE +   + DL
Sbjct: 283 ELAKVGDARNWQITWEGTLEARNEASSAQIRDL 315


>gi|283856246|ref|YP_162122.2| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|283775241|gb|AAV89011.2| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 304

 Score =  153 bits (387), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 11/154 (7%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T  A  G  R +++ +L EV+ + + +G     +I S  +K     F     +AS R  T
Sbjct: 159 TTAATTGKARLYTEALLKEVLGDIWVSGGQPNMVITSLKLKQTAAAF---PGLASNRRDT 215

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
                   I+A ADIY    G+V   P+R   +++     A +IDP       L  I + 
Sbjct: 216 GD--QKARIIAGADIYVSDVGEVQFVPDRFCDNSS-----ALVIDPEYWSVATLDPIQK- 267

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +++A  G A++  L  E AL+  NE A GV+ADL
Sbjct: 268 RSLATTGLADRDALYTEIALRCHNEAASGVLADL 301


>gi|241760939|ref|ZP_04759028.1| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374558|gb|EER64019.1| putative phage major head protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 238

 Score =  153 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T  A  G  R +++ +L EV+ + + +G     +I S  +K     F     +AS R  T
Sbjct: 93  TTAATAGKARLYTEALLKEVLGDIWVSGGQPNMVITSLKLKQTAAAF---PGLASNRRDT 149

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
                   I+A ADIY    G+V   P+R   +++     A +IDP       L  I + 
Sbjct: 150 GD--QKARIIAGADIYVSDVGEVQFVPDRFCDNSS-----ALVIDPEYWSVATLDPIQK- 201

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +++A  G A++  L  E AL+  NE   GV+ADL
Sbjct: 202 RSLATTGLADRDALYTEIALRCHNEATSGVLADL 235


>gi|288817864|ref|YP_003432211.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
 gi|288787263|dbj|BAI69010.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
 gi|308751463|gb|ADO44946.1| putative phage major head protein [Hydrogenobacter thermophilus
           TK-6]
          Length = 291

 Score =  151 bits (381), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGK 64
           A  G+ R  ++ +L++ +Q+ +Q G N   ++VS   K     F +           +  
Sbjct: 153 ANGGSPRALTETLLNDGIQQAWQAGGNPDVVVVSGKNKRTVSSFTAGVTK-------TVA 205

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNI 124
           + +  +V+T D+Y+  FG V +  +R M  +       F+++    +  +LR   + + I
Sbjct: 206 AEDKKLVSTVDVYESDFGLVRIVADRWMPDS-----KVFILEKGRFKIAYLRPFKQ-QEI 259

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           AK GD  + V++GE  L+VR EKA  ++AD+
Sbjct: 260 AKVGDRIERVVVGELTLEVRAEKANAIIADI 290


>gi|167600435|ref|YP_001671935.1| major head protein [Pseudomonas phage LUZ24]
 gi|161168298|emb|CAP45463.1| major head protein [Pseudomonas phage LUZ24]
          Length = 317

 Score =  149 bits (376), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKS 65
             G  R  ++ +L    +  ++NG     I  S  +K    +     N+       +  +
Sbjct: 175 TAGDLRLLTEDMLLNASEAIWRNGGQANSIQTSSSIKKAISK-----NMKGRATEITLDA 229

Query: 66  HNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIA 125
            +N I  T D+Y+  FGK  +  NR    N       F+ DP M    +LR   + + +A
Sbjct: 230 SDNRIAQTVDVYESDFGKYTIRANRWFHENT-----MFIFDPKMHALCYLRPFFQHE-LA 283

Query: 126 KNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           K GD+ K  L+ E  L+V NEK+  ++ D+
Sbjct: 284 KTGDSEKRQLLVEYTLRVNNEKSGALIRDV 313


>gi|148257053|ref|YP_001241638.1| putative phage major head protein [Bradyrhizobium sp. BTAi1]
 gi|146409226|gb|ABQ37732.1| putative phage Major head protein [Bradyrhizobium sp. BTAi1]
          Length = 320

 Score =  147 bits (371), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T    DGTQ  F++  L  V+   + NG     I+   + K  F  F   S         
Sbjct: 175 TGTRTDGTQIAFTEARLKTVLSSIWINGGKPGTILTGAFNKQVFSTFTGRSTAIE----- 229

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE- 120
             ++ +  IVA+ D Y+  FGK+ V  +R      + AR+  +++ +     +L   +  
Sbjct: 230 --EAKSKKIVASVDAYESDFGKLKVVASRF-----QRARDVLVLEMDKWAVAYLNGRNMI 282

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVAD 154
              +AK GD+++  ++ E AL  RNEKA G + D
Sbjct: 283 SIPLAKTGDSDRRQILAEYALVARNEKASGGIFD 316


>gi|27476049|ref|NP_775251.1| major head protein [Pseudomonas phage PaP3]
 gi|27414479|gb|AAL85565.1| major head protein [Pseudomonas phage PaP3]
          Length = 317

 Score =  147 bits (370), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKS 65
             G  R  ++ +L    +  ++NG     I  S  +K    +     N+       +  +
Sbjct: 175 TAGDLRLLTEDMLLNASESIWRNGGQANSIQTSSSIKKAISK-----NMKGRATEITLDA 229

Query: 66  HNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIA 125
            +N I  T D+Y+  FGK  +  NR    N       F+ DP M    +LR   + + +A
Sbjct: 230 SDNRIAQTVDVYESDFGKYTIRANRWFHENT-----LFVFDPKMHSLCYLRPFFQHE-LA 283

Query: 126 KNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           K GD+ K  L+ E   +V NEK+  ++ D+
Sbjct: 284 KTGDSEKRQLLVEYTFRVNNEKSGALIRDV 313


>gi|227821704|ref|YP_002825674.1| putative phage related protein [Sinorhizobium fredii NGR234]
 gi|227340703|gb|ACP24921.1| putative phage related protein [Sinorhizobium fredii NGR234]
          Length = 123

 Score =  146 bits (369), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 77/112 (68%), Positives = 86/112 (76%)

Query: 25  GYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKV 84
           GYQNG NFRH+  SPYVKS FV FMSDSNVA FRYA S     NTIVATAD Y+ PFG V
Sbjct: 6   GYQNGANFRHVSASPYVKSVFVTFMSDSNVAPFRYAVSKGGERNTIVATADYYEGPFGTV 65

Query: 85  MVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLI 136
           M+HPNRV A+ A  ARNAF ID +ML FLWLR I EDK++AK GDA+KGV+ 
Sbjct: 66  MIHPNRVQATGATQARNAFFIDTDMLSFLWLRKIQEDKDVAKTGDADKGVIT 117


>gi|291334405|gb|ADD94061.1| major head protein [uncultured phage MedDCM-OCT-S01-C1]
          Length = 344

 Score =  136 bits (341), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 6/159 (3%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +T K  +      S Q + + +Q  Y+ G    H++ +P V      +M D N A     
Sbjct: 180 LTVKYTEDDGVALSFQAVKDAIQGVYEQGGEVTHLMSNPGVIGALSSYMFD-NEARVATL 238

Query: 61  TSGKS----HNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR 116
           TS +        T +++ ++    FG + + PNR+    A     AFL+DP  +   +L 
Sbjct: 239 TSDQGAPANSKATALSSVNVLVSDFGTIKLVPNRLQPLAANGTAVAFLLDPEYVSLSYLE 298

Query: 117 TIHEDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
               D  +AK G A K  +  +  L+V  EKA G++ ++
Sbjct: 299 GYRTD-TLAKTGLAEKRQISVDWGLRVHTEKAHGMLVNI 336


>gi|294083943|ref|YP_003550700.1| major head protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663515|gb|ADE38616.1| major head protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 133

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 14  SKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVAT 73
           ++  L +  Q  Y  G +    ++ P        F   S         +      T+V  
Sbjct: 2   TEAKLLDAHQAAYTAGADVSVFMIKPSDSEIVAGFTGSSGRTRNFNDGT-----TTLVNA 56

Query: 74  ADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKG 133
            D+   P+G + V  NR      +   +AFL+DP+M     LR +     ++K GD++K 
Sbjct: 57  VDVMINPYGTLKVVLNR-----HQLTTHAFLLDPSMWRSAVLRPVSRTL-LSKTGDSDKH 110

Query: 134 VLIGEGALKVRNEKAVGVVADL 155
             + EG L+  N+    ++  L
Sbjct: 111 FCVYEGGLQHLNQSGSAMITGL 132


>gi|316934287|ref|YP_004109269.1| putative phage major head protein [Rhodopseudomonas palustris DX-1]
 gi|315602001|gb|ADU44536.1| putative phage major head protein [Rhodopseudomonas palustris DX-1]
          Length = 304

 Score = 91.4 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 11/151 (7%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKS 65
              T    ++    +  Q  Y  G      +V+P     F  F   +  +      S   
Sbjct: 159 TGATGTKITEANYLDAAQALYDAGSEASITLVTPTNSRTFAGFTGAAGRSRVINDDS--- 215

Query: 66  HNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE-DKNI 124
               IV   ++Y  PFG+  +  +R        A +  L DP M   + L+  +   + +
Sbjct: 216 --KKIVNAVNLYVSPFGEEKIVLSR-----HLKAGDTLLFDPAMWARVILQGRNWFRETL 268

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           AK GD+ K +++GE  LK +N+KA  +V ++
Sbjct: 269 AKTGDSLKMMIVGEFGLKHKNQKASALVREM 299


>gi|307308932|ref|ZP_07588615.1| putative phage major head protein [Sinorhizobium meliloti BL225C]
 gi|306900566|gb|EFN31179.1| putative phage major head protein [Sinorhizobium meliloti BL225C]
          Length = 309

 Score = 82.2 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 13/155 (8%)

Query: 1   MTKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYA 60
           +     DGT R  S  ++ E+ +  +  G   + ++V P  K   V   + +        
Sbjct: 167 LVGAVTDGTARALSHALIVEMAEGIHSEGGVPKILLVPPAQKKNIVALSNGTTKFQ---- 222

Query: 61  TSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE 120
               +   T+     +Y+ PFG+  +  +R + S+          DP +      R +  
Sbjct: 223 ---DASKKTVFGDVTMYETPFGRFDIVTSRDVRSSTVIG-----YDPELWAQAVFRGL-T 273

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            K + + GD     +I E  L  RNE   G VADL
Sbjct: 274 KKKLPEGGDYEGYQVITEVTLVCRNEAGNGKVADL 308


>gi|226305754|ref|YP_002765714.1| hypothetical protein RER_22670 [Rhodococcus erythropolis PR4]
 gi|226184871|dbj|BAH32975.1| hypothetical protein RER_22670 [Rhodococcus erythropolis PR4]
          Length = 317

 Score = 74.1 bits (180), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 12/155 (7%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGD----NFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
            +GT    ++ +L ++MQ  ++NG       R I+V    K    +   D          
Sbjct: 171 TNGTPAALTETMLLDLMQLAWENGGIQESETRTIVVGAKQKRALTKIFIDGKGYKESTRN 230

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
            G  +  TI       +  FG+  +  NR M +      +     P  LE    +     
Sbjct: 231 VGGVNLQTI-------ETDFGRCNIMLNRYMPAAQLAVVSLEECAPRFLEIPG-KGHFFA 282

Query: 122 KNIAKNGDANKGVLIGEGALKVRNEKAVGVVADLF 156
           +++AK G + K  L GE  LK  NE     +  L 
Sbjct: 283 ESLAKTGASEKVQLYGEIGLKYGNELKHAKLTGLL 317


>gi|256377352|ref|YP_003101012.1| hypothetical protein Amir_3259 [Actinosynnema mirum DSM 43827]
 gi|255921655|gb|ACU37166.1| hypothetical protein Amir_3259 [Actinosynnema mirum DSM 43827]
          Length = 329

 Score = 71.4 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 14/159 (8%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGD----NFRHIIVSPYVKSEFV-RFMSDSNVAS 56
           T    + T    ++ ++ +++Q+ ++NG         ++   + K      F++  N   
Sbjct: 173 TNVITNSTPTPLTESMVIDLLQKVWENGGIQISETATLMCGAWQKRRLTDEFVTRKNYQE 232

Query: 57  FRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR 116
                 G         +    +  FG+V +  NR M ++A    +     P MLE     
Sbjct: 233 QTRNVGG--------VSVSTIETDFGRVNIMLNRHMPADAVQVVSLEQCAPVMLEKPG-S 283

Query: 117 TIHEDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
                + +AK G +++  + GE  L+   E A G +  L
Sbjct: 284 GFLFSEPLAKTGASDRVHIYGEIGLEYGPEIAHGKITGL 322


>gi|290457630|sp|P85987|CAPSD_BPSK1 RecName: Full=Major capsid protein; AltName: Full=Virion protein G
 gi|221271431|dbj|BAH15184.1| major capsid protein [Serratia phage KSP100]
          Length = 306

 Score = 69.1 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 12/141 (8%)

Query: 13  FSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVA 72
             +  L E+  + Y  G +   I+  P   + F      S      +      ++   V 
Sbjct: 160 LDEATLFEMTAKLYTEGADPTLIMYHPSNANFFASLQEKSGTRMRIFE-----NDKRFVK 214

Query: 73  TADIYDRPFG-KVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDAN 131
             +    P G ++   PNR    +A      ++ +P+ L    LR   +   +AK+G A 
Sbjct: 215 QVEYIVDPLGQELKCIPNRWCPEDAT-----YIFNPSDLGMAVLRA-PKKVALAKSGSAE 268

Query: 132 KGVLIGEGALKVRNEKAVGVV 152
           K ++  E   ++ N KA  ++
Sbjct: 269 KYMIEQEVGFRLNNPKAAALI 289


>gi|228910960|ref|ZP_04074768.1| hypothetical protein bthur0013_51010 [Bacillus thuringiensis IBL
           200]
 gi|228848615|gb|EEM93461.1| hypothetical protein bthur0013_51010 [Bacillus thuringiensis IBL
           200]
          Length = 363

 Score = 67.1 bits (162), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 15/134 (11%)

Query: 23  QEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFG 82
           + GY  G N++ IIV    K     F  D+ +       +G+          D Y   FG
Sbjct: 242 KGGYTVGGNYK-IIVGATQKIAISAF--DNALIRLSREDNGRGQ------VVDHYVSDFG 292

Query: 83  KVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTI-HEDKNIAKNGDANKGVLIGEGAL 141
              +  N  M      A    +ID N L    LRT     + + K GD  KG+L+GE  L
Sbjct: 293 NAEILLNNNMH-----AGEILVIDANRLSIRPLRTREFAHEFLGKKGDYMKGMLVGEYTL 347

Query: 142 KVRNEKAVGVVADL 155
           +   E A   +  L
Sbjct: 348 EFLQEAAHAKITGL 361


>gi|167583566|ref|YP_001671756.1| major head protein [Enterobacteria phage phiEco32]
 gi|164375404|gb|ABY52812.1| major head protein [Enterobacteria phage phiEco32]
          Length = 352

 Score = 66.0 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 11/155 (7%)

Query: 4   KAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
            +   T   F +  + ++  + Y  G     I+++P     F     ++  +  R   + 
Sbjct: 204 ASNPTTNIGFDEADIFDMTLQLYTAGSEADIIMINPAHAKIFAGLQENTQGSRKRIFEN- 262

Query: 64  KSHNNTIVATADIYDRPFGK-VMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
                  +   +    P G+   +  NR M ++A      +         + LR     +
Sbjct: 263 ---TKQFIYEVNSITDPLGQSYKIIVNRWMPTDA-----VYFFRSADWTQMVLRAPKRTE 314

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADLFG 157
            +AK+G   K ++  E  L+ RN  A GV+    G
Sbjct: 315 -LAKDGSYEKWMIEMEVGLRHRNPYASGVLFTAAG 348


>gi|261337429|ref|ZP_05965313.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
 gi|270277816|gb|EFA23670.1| conserved hypothetical protein [Bifidobacterium gallicum DSM 20093]
          Length = 160

 Score = 65.6 bits (158), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 22/154 (14%)

Query: 9   TQRTFSKQILDEVMQEGYQNGD----NFRHIIVSPYVKSEFVR-FMSDSNVASFRYATSG 63
             +T S+  + ++MQ  + NG       R I+V+  +K    R F+ D+          G
Sbjct: 6   AAKTLSEDDVLDLMQMAWDNGGIREAETRTIVVNSDLKRALTRIFIKDAGYKEETRNVGG 65

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR----TIH 119
                    +    +  FG+  +  + ++           ++  + L   +L        
Sbjct: 66  --------VSLQTIETDFGRCNIMLDSLV-----LKDKMLVLSLDQLAPRFLEIPGKGHF 112

Query: 120 EDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVA 153
             + +AK G ++K  L GE  L+  NEKA  V+ 
Sbjct: 113 FVEPLAKTGASDKVQLYGEIGLEYGNEKAHAVLT 146


>gi|256751057|ref|ZP_05491940.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750167|gb|EEU63188.1| conserved hypothetical protein [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 292

 Score = 64.1 bits (154), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 16/142 (11%)

Query: 12  TFSKQILDEVMQEGYQNG--DNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNT 69
            F +      +++ + NG   N    +V+  +K     F  +S            +    
Sbjct: 160 AFDEAQFKATVKKLWDNGLGSNQYIALVNADIKEIIDDFYKNST-----RYIGNVNEYGV 214

Query: 70  IVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGD 129
           +V   +     +G V +  NR +      A    + DP  +   +LRT   ++ +AK GD
Sbjct: 215 VVDKVN---TNYGVVNLVLNRHVP-----AGKMIVFDPAYVRLAFLRT-PSNEILAKTGD 265

Query: 130 ANKGVLIGEGALKVRNEKAVGV 151
              G +I E  LKV N KA+ +
Sbjct: 266 YISGQVITELTLKVLNAKALAL 287


>gi|196048420|ref|ZP_03115595.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196020677|gb|EDX59409.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 312

 Score = 63.3 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 11/153 (7%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGK 64
            KDG     S   L +  +  ++ G     ++      +EF+  +          A  G 
Sbjct: 159 PKDGK---LSADDLIKAFRLCWEKGAGGDKLVQCGSQVAEFIDKLFKVEKGVMIPAIQGG 215

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNI 124
              N I  TAD+    +G+  +  NR M   A T     ++D N ++   LR +   + +
Sbjct: 216 G--NIIGLTADVIHTRYGRGNIVLNRHMPDGALT-----IVDLNQVKLRPLRKML-AEPL 267

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADLFG 157
           AKNGD+ K +++GE +L+++N  A  V+  + G
Sbjct: 268 AKNGDSQKRMIVGEYSLELKNSYAGAVINGITG 300


>gi|302389556|ref|YP_003825377.1| hypothetical protein Toce_0992 [Thermosediminibacter oceani DSM
           16646]
 gi|302200184|gb|ADL07754.1| conserved hypothetical protein [Thermosediminibacter oceani DSM
           16646]
          Length = 294

 Score = 61.7 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 16/146 (10%)

Query: 9   TQRTFSKQILDEVMQEGYQNGDNFR--HIIVSPYVKSEFVRFMSDSNVASFRYATSGKSH 66
           T     +      +++ ++NG        +V+  +K           +   +Y       
Sbjct: 157 TGANLDEANFKATVKKLWENGLGINEYVALVNADLKEAIDA------IYDAKYQYIAPMQ 210

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLR-TIHEDKNIA 125
           +N            +G V +  NR M  +        + DP  L    LR  + E   +A
Sbjct: 211 DNYFGLVVRRVQTNYGNVNIILNRHMPVD-----KMVVFDPAYLRIANLREPVFEP--LA 263

Query: 126 KNGDANKGVLIGEGALKVRNEKAVGV 151
           K GD+ KG ++ E  LKV + KA+ +
Sbjct: 264 KTGDSVKGQVVAELTLKVLSPKAIAM 289


>gi|257458669|ref|ZP_05623796.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
 gi|257443942|gb|EEV19058.1| conserved hypothetical protein [Campylobacter gracilis RM3268]
          Length = 328

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSH 66
            GT    ++  L++++Q  +  G   R + +   +K     F           AT    +
Sbjct: 189 TGTPTVLTEDALNKILQNIWDAGATPRDVFIGAKLKKAINAF-----------ATRQFGN 237

Query: 67  NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAK 126
             +I ++    D  FGKV    +R ++   +        D + ++   L      +N+  
Sbjct: 238 EKSINSSVVSLDTDFGKVNFRLHRYLSEQNKLDDVLIAGDFSFMKNGLLIP-TMIENVTT 296

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +  A +     E  L+VRN  A  +   L
Sbjct: 297 SKTAKQKRYYTEATLEVRNADAFAIGVGL 325


>gi|114566839|ref|YP_753993.1| hypothetical protein Swol_1314 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337774|gb|ABI68622.1| hypothetical protein Swol_1314 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 398

 Score = 61.0 bits (146), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 16/142 (11%)

Query: 12  TFSKQILDEVMQEGYQNGDNFRHI--IVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNT 69
           T ++  + E +++ +  G +      +V+  +K +      D+  A+     + +S    
Sbjct: 160 TITEPKIKETVKKLWDAGMSSGTYIAMVNADLKEDI-----DALYANKYSYIAQESLFGL 214

Query: 70  IVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGD 129
           IV++       +G + +  NR M ++        + DP  ++  +LR  H +  +AK GD
Sbjct: 215 IVSSI---QTNYGTIKLVLNRHMPTD-----KMVVFDPAFVKISYLRQPHFEL-LAKTGD 265

Query: 130 ANKGVLIGEGALKVRNEKAVGV 151
           +  G +I E  LK+ N+KA+ V
Sbjct: 266 SINGHVIAEMTLKMLNQKAIAV 287


>gi|150021335|ref|YP_001306689.1| hypothetical protein Tmel_1457 [Thermosipho melanesiensis BI429]
 gi|149793856|gb|ABR31304.1| hypothetical protein Tmel_1457 [Thermosipho melanesiensis BI429]
          Length = 362

 Score = 59.8 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 14/143 (9%)

Query: 12  TFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIV 71
           T+S+      ++  Y NG       ++   K  F    SD  + +    T+G+       
Sbjct: 231 TWSEDNFRAFLKLIYDNGGYITEAWMNASTKQYFNSLNSDKLIVTQDERTAGRL------ 284

Query: 72  ATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED-KNIAKNGDA 130
              D Y   +G++ +  +  +           ++D + L+   L   +   + +AK GD+
Sbjct: 285 --VDGYLSEYGQISLKTSPHIPEGM-----IIVVDTSNLKIKPLSGRNMAYEPLAKTGDS 337

Query: 131 NKGVLIGEGALKVRNEKAVGVVA 153
            KG ++GE  L+ RN    G+  
Sbjct: 338 VKGQIVGEYTLEFRNPDGAGIFY 360


>gi|257451764|ref|ZP_05617063.1| hypothetical protein F3_01776 [Fusobacterium sp. 3_1_5R]
 gi|317058321|ref|ZP_07922806.1| predicted protein [Fusobacterium sp. 3_1_5R]
 gi|313683997|gb|EFS20832.1| predicted protein [Fusobacterium sp. 3_1_5R]
          Length = 371

 Score = 58.7 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 31/171 (18%)

Query: 3   KKAKDGTQRTFSKQILDE-------------VMQEGYQNGDNFR----HIIVSPYVKSEF 45
           K+  DG +R  +K  L +             V+++ ++ G +       + V    K + 
Sbjct: 212 KRGMDGVKRFLAKGQLVDAGGQEISLEIIGNVLRKIFEAGGDVNGGNYALYVPGVQKVKI 271

Query: 46  VRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLI 105
            + + D   A            NT+ A A+     FG + + P     +    A    ++
Sbjct: 272 SKLLKDYIQAP--------PSENTLGAVANYVATDFGTLPIIP-----TVNLRADEMMIL 318

Query: 106 DPNMLEFLWLRTIH-EDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           + + +    LRT   + + + K GD  KG+++ E +++VRN   +G++ +L
Sbjct: 319 NHDDITLQVLRTRELQHEYMGKTGDNTKGLIVTELSVEVRNIPTMGMIMNL 369


>gi|229187822|ref|ZP_04314947.1| hypothetical protein bcere0004_53480 [Bacillus cereus BGSC 6E1]
 gi|228595657|gb|EEK53352.1| hypothetical protein bcere0004_53480 [Bacillus cereus BGSC 6E1]
          Length = 313

 Score = 58.3 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGK 64
              G     S + + +  +  ++ G     ++      +EF+  +    V       + +
Sbjct: 159 PTSGK---LSAEDVTKAFRLCWEKGAGGDKLVQCGSAVAEFIDKLFK--VDKGVVIPAIQ 213

Query: 65  SHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNI 124
              N I  T D+    +G+  +  NR M   A T     ++D N  +   LR +   + +
Sbjct: 214 GGGNIIGITVDVIHTRYGRGNIVLNRHMPDGALT-----IVDLNQTKLRPLRKMA-AQKL 267

Query: 125 AKNGDANKGVLIGEGALKVRNEKAVGVVADLFGLSK 160
           +K GD++K +++GE +L+++N  A  V++ + G+ +
Sbjct: 268 SKIGDSDKQMIVGEYSLELKNSYAGAVISGITGIVE 303


>gi|152975085|ref|YP_001374602.1| hypothetical protein Bcer98_1285 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023837|gb|ABS21607.1| conserved hypothetical protein [Bacillus cytotoxicus NVH 391-98]
          Length = 293

 Score = 57.5 bits (137), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHI--IVSPYVKSEFVRFMSDSNVASFRYATSG 63
              T+   +++ + E++++ +  G+       +V   +K +      D      RY+   
Sbjct: 154 NGVTKDVLTEKEVKELVKKLWTAGNENGEFYALVGADLKDQIDELYKD------RYSYQH 207

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
            + +  I  T D  +  +GK+    +R M ++          D N ++  +LR   + + 
Sbjct: 208 VTTDFGI--TVDSVNTSYGKINFILDRYMPAD-----KIVAFDVNAIKVAFLRQ-PQFQA 259

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGV 151
           + K GD +KG ++ E  L+V ++KAV V
Sbjct: 260 LGKTGDNDKGQVVAEATLEVGSKKAVAV 287


>gi|229162523|ref|ZP_04290484.1| hypothetical protein bcere0009_32950 [Bacillus cereus R309803]
 gi|228621002|gb|EEK77867.1| hypothetical protein bcere0009_32950 [Bacillus cereus R309803]
          Length = 293

 Score = 57.5 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 16/148 (10%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHI--IVSPYVKSEFVRFMSDSNVASFRYATSG 63
              T     ++ + E++++ +  G+       +V   +K +      D      RY+   
Sbjct: 154 NGATANVLQEKEVKELVKKLWTAGNENGEFYALVGADIKDQIDELYKD------RYSYQH 207

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
            +++  IV   +  +  +GKV    +R M ++          D N L+  +LR   + + 
Sbjct: 208 VTNDFGIV--VNSVETSYGKVNFILDRYMPAD-----KIVAFDINALKVAFLRQ-PQFEA 259

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGV 151
           + K GD  KG ++ E  L+V ++KAV V
Sbjct: 260 LGKTGDNIKGQVVAEATLEVGSKKAVAV 287


>gi|281417131|ref|ZP_06248151.1| conserved hypothetical protein [Clostridium thermocellum JW20]
 gi|281408533|gb|EFB38791.1| conserved hypothetical protein [Clostridium thermocellum JW20]
          Length = 292

 Score = 56.7 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 18/141 (12%)

Query: 14  SKQILDEVMQEGYQNG---DNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTI 70
           ++     V++  +  G     F    V+   K     F ++    +    T G   N  I
Sbjct: 165 TQNDFKAVVKRLWDCGLGSGEFYCF-VNADFKEIIDGFYANQINYNMPMNTFGFVANKII 223

Query: 71  VATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDA 130
                     +G V V  NR M  +        ++DP  L  ++LR     + +AK+GD 
Sbjct: 224 --------TNYGIVNVVLNRHMPVD-----KILVVDPTYLRLVYLRK-PSFEMLAKDGDN 269

Query: 131 NKGVLIGEGALKVRNEKAVGV 151
            KG++I E  LK+ N KAV V
Sbjct: 270 LKGMVITELTLKLLNSKAVAV 290


>gi|217961109|ref|YP_002339677.1| hypothetical protein BCAH187_A3735 [Bacillus cereus AH187]
 gi|229140327|ref|ZP_04268882.1| hypothetical protein bcere0013_34260 [Bacillus cereus BDRD-ST26]
 gi|217064163|gb|ACJ78413.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|228642888|gb|EEK99164.1| hypothetical protein bcere0013_34260 [Bacillus cereus BDRD-ST26]
          Length = 293

 Score = 56.4 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 6   KDGTQRTFSKQILDEVMQEGYQNGDNFRHI--IVSPYVKSEFVRFMSDSNVASFRYATSG 63
              T+   +++ + E++++ +  G+       +V   +K +      D      RY+   
Sbjct: 154 NGATKDVLTEKEIKELVKKLWTAGNENGEFYALVGADLKDQIDELYKD------RYSYQH 207

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
            + +  IV   +  +  +GKV    +R M ++          D N L+  +LR   + + 
Sbjct: 208 VTTDFGIV--VNSVETSYGKVNFILDRYMPAD-----KIVAFDVNALKVAFLRQ-PQFEQ 259

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGV 151
           + K GD  KG ++ E +L+V ++KAV V
Sbjct: 260 LGKTGDNVKGQVVAECSLEVGSKKAVAV 287


>gi|331088860|ref|ZP_08337770.1| hypothetical protein HMPREF1025_01353 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330407383|gb|EGG86886.1| hypothetical protein HMPREF1025_01353 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 314

 Score = 56.0 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 9   TQRTFSKQILDEVMQEGYQNGDNFRHI-IVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           T    S+    + +Q+ + +G    +   V+   K          N  + R+     S  
Sbjct: 161 TAGALSEDHFLDALQKMWDHGAQGAYFAFVNATQKRAINALAKTGN--NVRWVLDNGSVT 218

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N            FG++ +  +R M +N         +D + +    LR     +++ K 
Sbjct: 219 NVYGIAVSKIVTDFGEISLVLDRYMDNNT-----ILTLDLDEVRIAELRGTF-YEDLPKA 272

Query: 128 GDANKGVLIGEGALKVRNEKAVGVV 152
           GD  KG +I E  +K+ N  A   +
Sbjct: 273 GDYFKGHVINESTIKLLNSYAGSKI 297


>gi|163937921|ref|YP_001642807.1| hypothetical protein BcerKBAB4_5338 [Bacillus weihenstephanensis
           KBAB4]
 gi|163865776|gb|ABY46832.1| hypothetical protein BcerKBAB4_5338 [Bacillus weihenstephanensis
           KBAB4]
          Length = 391

 Score = 55.6 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 22/148 (14%)

Query: 15  KQILDEVMQEGYQ-----NGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNT 69
             +L    +  ++     +G NF+ IIV    K    +F      A  R           
Sbjct: 232 DDMLINAFRSIFEKGGMNSGGNFK-IIVGGTQKVAISQF----GNAQIRLDRLDNGRGQV 286

Query: 70  IVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEF--LWLRTIHEDKNIAKN 127
                D Y   FG   +  N     N   +    ++D N +    L  R     + + K 
Sbjct: 287 ----VDHYMSDFGAAEIVLN-----NNLRSDEILIVDSNRISIRPLTTREFS-HEFLGKK 336

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
           GD  KG+L+GE  ++   E+A   +  +
Sbjct: 337 GDYMKGMLVGEYTMEFLQEQAHARITGV 364


>gi|154174521|ref|YP_001409081.1| hypothetical protein CCV52592_0028 [Campylobacter curvus 525.92]
 gi|112803013|gb|EAU00357.1| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 327

 Score = 55.6 bits (132), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 12/148 (8%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           G     ++ +L +++Q+ + +G   + + +   +K          N  + R   + K+ N
Sbjct: 190 GANTPLTEDVLSQILQQIWDSGATPKDVFIGAALKPAI-------NKLATRQFGNEKAIN 242

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           + +V+     D  FGKV    +R +++    A      D    +        E +++  +
Sbjct: 243 SRVVS----LDTDFGKVNFRMHRFLSAKYGLADTLIAGDFEFAKNGLFLP-TEIEDVPTS 297

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
             A +     E  L++RN  A  +   L
Sbjct: 298 KTAKQKRYYTECCLEIRNPAAFAIGVGL 325


>gi|229037842|ref|ZP_04189640.1| hypothetical protein bcere0028_57530 [Bacillus cereus AH1271]
 gi|228727464|gb|EEL78642.1| hypothetical protein bcere0028_57530 [Bacillus cereus AH1271]
          Length = 315

 Score = 53.7 bits (127), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 55/147 (37%), Gaps = 18/147 (12%)

Query: 13  FSKQILDEVMQEGYQNGDNFR--HIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTI 70
            +K + +++++    NG +F    + V+ + K                    G +  +  
Sbjct: 180 LNKDLFNQLLRMMATNGADFNEMVLYVNAFNKQVVS-------------EIFGYAPQDRN 226

Query: 71  VATADI--YDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNG 128
           V   +I   +  F KV +  +R + + +    +  ++ P +      + +   + +AK G
Sbjct: 227 VGGVNIQQIETDFAKVGIVWDRFVPAGSIGLFDMSVVAPVLQNVPD-KGVLFYEELAKTG 285

Query: 129 DANKGVLIGEGALKVRNEKAVGVVADL 155
            A KG + GE  L        G +  L
Sbjct: 286 AAEKGQIYGEIGLAHGPAFMHGSITGL 312


>gi|238909129|ref|YP_002939596.1| hypothetical protein EUBELI_10025 [Eubacterium eligens ATCC 27750]
 gi|238873366|gb|ACR73075.1| Hypothetical protein EUBELI_10025 [Eubacterium eligens ATCC 27750]
          Length = 304

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 9/146 (6%)

Query: 9   TQRTFSKQILDEVMQEGYQNGDNFRHII-VSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           T+   ++    + +Q+ + +G    +   V+  +K          N  + R+     S  
Sbjct: 161 TKGALTEDHFLDALQKMWDHGAQGEYFSFVNANIKRMINNLAKAGN--NVRFLGDNGSMQ 218

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N +          FG++ +  +R   +          +D   ++   LR     +++ K 
Sbjct: 219 NVLGIGVQKIVTDFGEISLVLDRYADTKT-----ILTVDLGEVQIAELRGTF-YEDLPKA 272

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVA 153
           GD  KG ++ E  +K+ N  A   ++
Sbjct: 273 GDYFKGHVLNESTIKLLNSHAGSKIS 298


>gi|257463376|ref|ZP_05627772.1| hypothetical protein FuD12_05953 [Fusobacterium sp. D12]
 gi|317060946|ref|ZP_07925431.1| predicted protein [Fusobacterium sp. D12]
 gi|313686622|gb|EFS23457.1| predicted protein [Fusobacterium sp. D12]
          Length = 369

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 69/171 (40%), Gaps = 31/171 (18%)

Query: 2   TKKAKDGTQRTFSKQILDE-------------VMQEGYQNGDNFR----HIIVSPYVKSE 44
           TK+  DG +R   K  L +             V+++ ++ G +       + V    K +
Sbjct: 211 TKRGMDGVKRFLVKGQLVDAGGQDISLEMIGNVLRKIFEVGGDVDGGNYALYVPGIQKVK 270

Query: 45  FVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFL 104
             + + D   A            +T+ A A      FG + + P     +         +
Sbjct: 271 ISKLLKDYIQAP--------PAEHTLGAVATYIATDFGTLPIIP-----TTNLRGDEMMI 317

Query: 105 IDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           ++ + +E   LR +   K + + GD  KG+++ E +++VRN   +G++ +L
Sbjct: 318 LNHDDIEAKVLRGLS-HKYMGETGDNTKGLIVTELSVQVRNIHTMGMIVNL 367


>gi|153951462|ref|YP_001398222.1| hypothetical protein JJD26997_1140 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938908|gb|ABS43649.1| hypothetical protein JJD26997_1140 [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 344

 Score = 53.3 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 14/155 (9%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GT    ++  L+ ++Q  + +G   + + +   +K    +F           AT    + 
Sbjct: 191 GTSTELTEDKLNIILQTIWNSGVAPKDVFLGADLKGAINKF-----------ATRILGNE 239

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEF-LWLRTIHEDKNIAK 126
             +V      +  FG V  H +R++++           D   ++  L++ T+ E+     
Sbjct: 240 TKLVGQVVSLETDFGTVNFHMHRLLSAKYGLGDVLIAGDFEYMKHGLYIPTMIEEVTTDI 299

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVVADLFGLSKT 161
              A +     +  L+VRN  A  +   L   + T
Sbjct: 300 TAKAKR--FYTQSTLEVRNADAFAIGVGLTSTNNT 332


>gi|57237589|ref|YP_178603.1| hypothetical protein CJE0587 [Campylobacter jejuni RM1221]
 gi|57166393|gb|AAW35172.1| hypothetical protein CJE0587 [Campylobacter jejuni RM1221]
          Length = 344

 Score = 52.9 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 14/149 (9%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GT    ++  L++++Q  + +G   + + +   +K    +F           AT    + 
Sbjct: 191 GTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKF-----------ATRILGNE 239

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEF-LWLRTIHEDKNIAK 126
             +       +  FG V  H +R+++            D   ++  L++ T+ ED     
Sbjct: 240 TKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDI 299

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVVADL 155
              A +     +  L+VRN  A  +   L
Sbjct: 300 TAKAKR--FYTQSTLEVRNADAFAIGVGL 326


>gi|283956330|ref|ZP_06373810.1| hypothetical protein C1336_000250101 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792050|gb|EFC30839.1| hypothetical protein C1336_000250101 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 344

 Score = 52.9 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 14/149 (9%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GT    ++  L++++Q  + +G   + + +   +K    +F           AT    + 
Sbjct: 191 GTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKF-----------ATRILGNE 239

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEF-LWLRTIHEDKNIAK 126
             +       +  FG V  H +R+++            D   ++  L++ T+ ED     
Sbjct: 240 TKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDI 299

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVVADL 155
              A +     +  L+VRN  A  +   L
Sbjct: 300 TAKAKR--FYTQSTLEVRNADAFAIGVGL 326


>gi|315929828|gb|EFV08993.1| hypothetical protein CSS_0883 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 344

 Score = 52.1 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 14/149 (9%)

Query: 8   GTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           GT    ++  L++++Q  + +G   + + +   +K    +F           AT    + 
Sbjct: 191 GTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKF-----------ATRILGNE 239

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEF-LWLRTIHEDKNIAK 126
             +       +  FG V  H +R+++            D   ++  L++ T+ ED     
Sbjct: 240 TKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDI 299

Query: 127 NGDANKGVLIGEGALKVRNEKAVGVVADL 155
              A +     +  L++RN  A  +   L
Sbjct: 300 TAKAKR--FYTQSTLEIRNADAFAIGVGL 326


>gi|319789007|ref|YP_004150640.1| phage protein [Thermovibrio ammonificans HB-1]
 gi|317113509|gb|ADU95999.1| phage protein [Thermovibrio ammonificans HB-1]
          Length = 373

 Score = 51.7 bits (122), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 13/146 (8%)

Query: 13  FSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVA 72
            ++ +L++ +++  Q+G +   ++ +     +   F ++ N+   R   +  +     VA
Sbjct: 236 LTQTLLNDTIEKIVQDGGSPNVLVCNTTQARKISAFNAN-NIIVQREDQTAGNFVARFVA 294

Query: 73  TADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRT--IHEDKNIAKNGDA 130
                  P G +      V+ +N    + A ++D + L  + LR   I +        D 
Sbjct: 295 DL-----PAGVITTI---VVDTNFPKDKIA-ILDTSRLRLVPLRGSTIRDFDATPNGADF 345

Query: 131 NKGVLIGEGALKVRNEK-AVGVVADL 155
               ++GE  L+VRN K A G++  L
Sbjct: 346 IARRILGEYTLEVRNAKQAHGLLEGL 371


>gi|291526329|emb|CBK91916.1| hypothetical protein EUR_29920 [Eubacterium rectale DSM 17629]
          Length = 304

 Score = 50.6 bits (119), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 57/146 (39%), Gaps = 9/146 (6%)

Query: 9   TQRTFSKQILDEVMQEGYQNGDNFRHII-VSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           T+   +++   + +QE +++G    +   V+  +K          N  + R+     S  
Sbjct: 161 TKGALTEEHFLDALQEMWKHGAQGEYFSFVNANIKRMINDLAKAGN--NVRFLGDNGSMQ 218

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
           N +          FG++ +  +R   +          +D   ++   LR     +++ K 
Sbjct: 219 NVLGIGVQKIVTDFGEISLVLDRYADTKT-----ILTVDLAEVQIAELRGTF-YEDLPKA 272

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVA 153
           GD  +G ++ E  +K+ N  A   ++
Sbjct: 273 GDYYRGHVLNESTIKLLNSFAGSKIS 298


>gi|169827502|ref|YP_001697660.1| hypothetical protein Bsph_1941 [Lysinibacillus sphaericus C3-41]
 gi|168991990|gb|ACA39530.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 288

 Score = 50.6 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHI--IVSPYVKSEFVRFMSDSNVASFRYATS 62
           A +       ++ + +VM+  +        +   V+  +K +      D+   +    + 
Sbjct: 149 ATNAVTAPIDEKAIKQVMRNLWNQNLAEGQVYAFVNADIKEKIDAIYKDNYSYNHVTTSF 208

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
           G           D  +  +G V    ++ + ++          +   ++  +LR  H  +
Sbjct: 209 GLL--------VDEINTNYGSVKFVLSKHVPAD-----KVVFFNDAYVDLAYLREPH-FE 254

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVA 153
            +AK GD+ KG ++ E  LKV ++KAV V+ 
Sbjct: 255 PLAKTGDSVKGQVVAEATLKVGSKKAVAVLT 285


>gi|319649918|ref|ZP_08004068.1| hypothetical protein HMPREF1013_00673 [Bacillus sp. 2_A_57_CT2]
 gi|317398356|gb|EFV79044.1| hypothetical protein HMPREF1013_00673 [Bacillus sp. 2_A_57_CT2]
          Length = 292

 Score = 48.6 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 56/145 (38%), Gaps = 18/145 (12%)

Query: 12  TFSKQILDEVMQEGYQNG---DNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNN 68
             ++  + +VM+  +       N    + +   +     +      +    +        
Sbjct: 158 AITEDDVKKVMRNLWNQDLAEGNVYAFLNADLKEQIDAIYKDKYGYSHVTTSFGL----- 212

Query: 69  TIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNG 128
            +V + +     +G V    ++ + ++        + +   ++  +LR  H  + +AK G
Sbjct: 213 -LVESIN---TNYGTVHFVLSKHVPAD-----KIVVFNDAYVDLAYLREPH-FEPLAKTG 262

Query: 129 DANKGVLIGEGALKVRNEKAVGVVA 153
           D+ KG +I E  +KV ++K V V+ 
Sbjct: 263 DSVKGQVIAEATVKVGSKKGVAVLT 287


>gi|228941057|ref|ZP_04103614.1| hypothetical protein bthur0008_36970 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973988|ref|ZP_04134562.1| hypothetical protein bthur0003_37430 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980577|ref|ZP_04140886.1| hypothetical protein bthur0002_37450 [Bacillus thuringiensis Bt407]
 gi|228779138|gb|EEM27396.1| hypothetical protein bthur0002_37450 [Bacillus thuringiensis Bt407]
 gi|228785714|gb|EEM33719.1| hypothetical protein bthur0003_37430 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818600|gb|EEM64668.1| hypothetical protein bthur0008_36970 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939625|gb|AEA15521.1| Phage protein [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 374

 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 12/145 (8%)

Query: 17  ILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADI 76
           +L++ +++ +  G +   I+  P +  +  +   D    + R      +    I++    
Sbjct: 240 LLNDAVEQVFTRGGSANTILCGPNIARQITKLGGD----TIRTTRQDTAAGYQILS---- 291

Query: 77  YDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLI 136
           +        +    V+         A L+D   ++  +L  I++        D    V+ 
Sbjct: 292 FVSDLPGGAISS--VVVDLNMPKDRALLLDTEKVKARYLTPIYDQDATPNGADYFSRVIR 349

Query: 137 GEGALKVRNEKAVGVVADLFGLSKT 161
           GE   +V+N K    +A L  +SKT
Sbjct: 350 GEFGFEVKNAKES--IAVLENISKT 372


>gi|281355462|ref|ZP_06241956.1| hypothetical protein Vvad_PD3568 [Victivallis vadensis ATCC
           BAA-548]
 gi|281318342|gb|EFB02362.1| hypothetical protein Vvad_PD3568 [Victivallis vadensis ATCC
           BAA-548]
          Length = 403

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 11/144 (7%)

Query: 2   TKKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYAT 61
           T  A D +    + +++++ + +  + G N   +  +P             N        
Sbjct: 228 TALAVDASGGRLTSKLVNDAVMKVTEEGGNPTALYCTPDQARVLA------NEYKNNITV 281

Query: 62  SGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHED 121
                   +     + +     + +              +A+L D +     W+R + + 
Sbjct: 282 MRDDKARGVYVAVVVNEANGQNIEII-----GDPDFNDADAWLCDDDCFALSWMRPVGDT 336

Query: 122 KNIAKNGDANKGVLIGEGALKVRN 145
            +   + D     ++GE  L+  N
Sbjct: 337 DSTPPDADGISRKMVGEFTLEFHN 360


>gi|229020770|ref|ZP_04177493.1| hypothetical protein bcere0030_52440 [Bacillus cereus AH1273]
 gi|228740571|gb|EEL90846.1| hypothetical protein bcere0030_52440 [Bacillus cereus AH1273]
          Length = 374

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           L++ +++ +  G +   I+  P +  +  +   D    + R      +    I++    +
Sbjct: 241 LNDAVEQVFTRGGSANTILCGPNIARQITKLGGD----TIRTTRQDTAAGYQILS----F 292

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                   +    V+         A L+D   ++  +L  I++        D    V+ G
Sbjct: 293 VSDLPGGAISS--VVVDLNMPKDRALLLDTEKVKARYLTPIYDQDATPNGADYFSRVIRG 350

Query: 138 EGALKVRNEKAVGVVADLFGLSKT 161
           E   +V+N K    +A L  +SKT
Sbjct: 351 EFGFEVKNAKES--IAVLENISKT 372


>gi|218897919|ref|YP_002446330.1| phage protein [Bacillus cereus G9842]
 gi|218542918|gb|ACK95312.1| phage protein [Bacillus cereus G9842]
          Length = 374

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           L++ +++ +  G +   I+  P +  +  +   D    + R      +    I++    +
Sbjct: 241 LNDAVEQVFTRGGSANTILCGPNIARQITKLGGD----TIRTTRQDTAAGYQILS----F 292

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                   +    V+         A L+D   ++  +L  I++        D    V+ G
Sbjct: 293 VSDLPGGAISS--VVVDLNMPKDRALLLDTEKVKARYLTPIYDQDATPNGADYFSRVIRG 350

Query: 138 EGALKVRNEKAVGVVADLFGLSKT 161
           E   +V+N K    +A L  +SKT
Sbjct: 351 EFGFEVKNAKES--IAVLENISKT 372


>gi|30020036|ref|NP_831667.1| Phage protein [Bacillus cereus ATCC 14579]
 gi|31415788|ref|NP_852528.1| hypothetical protein BC1894 [Bacillus phage phBC6A51]
 gi|229127327|ref|ZP_04256323.1| hypothetical protein bcere0015_17800 [Bacillus cereus BDRD-Cer4]
 gi|29895581|gb|AAP08868.1| Phage protein [Bacillus phage phBC6A51]
 gi|228656160|gb|EEL12002.1| hypothetical protein bcere0015_17800 [Bacillus cereus BDRD-Cer4]
          Length = 374

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 12/144 (8%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           L++ +++ +  G +   I+  P +  +  +   D    + R      +    I++    +
Sbjct: 241 LNDAVEQVFTRGGSANTILCGPNIARQITKLGGD----TIRTTRQDTAAGYQILS----F 292

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                   +    V+         A L+D + ++  +L  I++        D    V+ G
Sbjct: 293 VSDLPGGAISS--VVVDLNMPKDRALLLDTDKVKARYLTPIYDQDATPNGADYFSRVIRG 350

Query: 138 EGALKVRNEKAVGVVADLFGLSKT 161
           E   +V+N K    +A L  +SKT
Sbjct: 351 EFGFEVKNAKES--IAVLENISKT 372


>gi|228968787|ref|ZP_04129749.1| hypothetical protein bthur0004_55460 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228790850|gb|EEM38489.1| hypothetical protein bthur0004_55460 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 374

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           L++ +++ +  G +   I+  P +  +  +   D    + R      +    I++    +
Sbjct: 241 LNDAVEQVFTRGGSANTILCGPNIARQITKLGGD----TIRTTRQDTAAGYQILS----F 292

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                   +    V+         A L+D   ++  +L  I++        D    V+ G
Sbjct: 293 VSDLPGGAISS--VVVDLNMPKDRALLLDTEKVKARYLTPIYDQDATPNGADYFSRVIRG 350

Query: 138 EGALKVRNEKAVGVVADLFGLSKT 161
           E   +V+N K    +A L  +SKT
Sbjct: 351 EFGFEVKNAKES--IAVLENISKT 372


>gi|229190579|ref|ZP_04317576.1| hypothetical protein bcere0002_22460 [Bacillus cereus ATCC 10876]
 gi|228592924|gb|EEK50746.1| hypothetical protein bcere0002_22460 [Bacillus cereus ATCC 10876]
          Length = 374

 Score = 44.8 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 12/144 (8%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           L++ +++ +  G +   I+  P +  +  +   D  + + R  T+      + V+  D+ 
Sbjct: 241 LNDAVEQVFTRGGSANTILCGPNIARQITKLGGD-TIRTTRQDTTAGYQILSFVS--DLP 297

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                 V+V  N  M  +      A L+D   ++  +L  I++        D    V+ G
Sbjct: 298 GGAISSVVVDLN--MPKD-----RALLLDTEKVKARYLTPIYDQDATPNGADYFSRVIRG 350

Query: 138 EGALKVRNEKAVGVVADLFGLSKT 161
           E   +V+N K    +A L  +SKT
Sbjct: 351 EFGFEVKNAKES--IAVLENISKT 372


>gi|319956911|ref|YP_004168174.1| hypothetical protein Nitsa_1172 [Nitratifractor salsuginis DSM
           16511]
 gi|319419315|gb|ADV46425.1| hypothetical protein Nitsa_1172 [Nitratifractor salsuginis DSM
           16511]
          Length = 308

 Score = 44.0 bits (102), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 14/144 (9%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGD---NFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
           +G     +   L E+++  ++ G        +I    VK    RF  D     F    SG
Sbjct: 165 NGNPTVLTYDSLSEIIEPVWERGGIEDESFMLICGTSVKRAINRFAGD----QFFRKVSG 220

Query: 64  KSH-NNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
           K   + T+       +  FG V V  +R+   N E  R+  L+       +  +T  E  
Sbjct: 221 KEKFDPTLFE----LETDFGTVQVKIHRLF--NQEKLRDKILVGKLSEARIMFQTSTEFT 274

Query: 123 NIAKNGDANKGVLIGEGALKVRNE 146
            +  +  A  G    +  L+V+N 
Sbjct: 275 EVPTDKTAKFGRYYTDLTLEVKNP 298


>gi|134299981|ref|YP_001113477.1| hypothetical protein Dred_2135 [Desulfotomaculum reducens MI-1]
 gi|134052681|gb|ABO50652.1| hypothetical protein Dred_2135 [Desulfotomaculum reducens MI-1]
          Length = 285

 Score = 42.5 bits (98), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 18/147 (12%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHI-IVSPYVKSEFVRFMSDSNVASFRYATSG 63
           A   T  TF+K   +EV+ + Y  G N   +  +   +K +   F +   +A   +    
Sbjct: 151 ANKVTNATFTKTKFEEVVGKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFD 210

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                        Y  P+G V          + +     F+++PN LE   L   H    
Sbjct: 211 TER----------YVTPYGIVTFV------LSEKLNNKLFIVNPNYLELAELIPFHAVPQ 254

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVG 150
            A +G      L  +  LK+ N KA  
Sbjct: 255 -AVSGSKQSVYLETQFGLKLLNTKAAA 280


>gi|134298256|ref|YP_001111752.1| hypothetical protein Dred_0379 [Desulfotomaculum reducens MI-1]
 gi|134050956|gb|ABO48927.1| hypothetical protein Dred_0379 [Desulfotomaculum reducens MI-1]
          Length = 285

 Score = 42.5 bits (98), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 18/143 (12%)

Query: 9   TQRTFSKQILDEVMQEGYQNGDNFRHI-IVSPYVKSEFVRFMSDSNVASFRYATSGKSHN 67
           T  TF+K   +EV+ + Y  G N   +  +   +K +   F +   +A   +        
Sbjct: 155 TNATFTKTKFEEVVSKMYDAGVNDEMLCFLPAQMKIQLNSFSNVEFLARDMFLGFDTER- 213

Query: 68  NTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKN 127
                    Y  P+G V          + +     F+++PN LE   L   H       +
Sbjct: 214 ---------YVTPYGIVTFV------LSEKLNNKLFIVNPNYLELAELIPFHATVEPV-S 257

Query: 128 GDANKGVLIGEGALKVRNEKAVG 150
           G      L  +  LK+ N KA  
Sbjct: 258 GSKQSIYLETQFGLKLLNTKAAA 280


>gi|323703894|ref|ZP_08115527.1| hypothetical protein DesniDRAFT_2739 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531143|gb|EGB21049.1| hypothetical protein DesniDRAFT_2739 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 285

 Score = 42.1 bits (97), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 18/147 (12%)

Query: 5   AKDGTQRTFSKQILDEVMQEGYQNGDNFRHI-IVSPYVKSEFVRFMSDSNVASFRYATSG 63
           A   T  +F+K   +E + + Y  G N   I  +   +K     F +   +A   +    
Sbjct: 151 ANQVTNTSFTKAKFEETVAKMYDAGVNDEMICFIPAQMKIALNGFNNVEFLARDMFQGFD 210

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                        Y  P+G +          + +     F+++PN LE   L   H    
Sbjct: 211 TEK----------YVTPYGIITFV------LSEKLQNKLFIVNPNYLELAELIPFHAVPQ 254

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVG 150
              +G      L  +  LK+ N KA  
Sbjct: 255 PV-SGSKQSIYLETQFGLKLLNSKAAA 280


>gi|322818742|gb|EFZ26063.1| hypothetical protein TCSYLVIO_7770 [Trypanosoma cruzi]
          Length = 756

 Score = 40.9 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATA--D 75
           L  V+    +NG +   I   PY++    RF+S   +   R   +      T+ + A  D
Sbjct: 119 LVSVVIAILENGGDDGVIASGPYLEWYRSRFVSMDAIYGLRSTLNAVPPRATLSSAAEED 178

Query: 76  IYDRPFGKVMVHPNR-VMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIA 125
           +++   G  M+   R  +A     A        + L    +     +   A
Sbjct: 179 LFEGLLGPYMISIQRAFLAGLFPVAAELISSLVDYLRSCEIDPFDAEDESA 229


>gi|71655038|ref|XP_816128.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881234|gb|EAN94277.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 756

 Score = 40.9 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATA--D 75
           L  V+    +NG +   I   PY++    RF+S   +   R   +      T+ + A  D
Sbjct: 119 LVSVVIAILENGGDDGVIASGPYLEWYRSRFVSMDAIYGLRSTLNAVPPRATLSSAAEED 178

Query: 76  IYDRPFGKVMVHPNR-VMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIA 125
           +++   G  M+   R  +A     A        + L    +     +   A
Sbjct: 179 LFEGLLGPYMISIQRAFLAGLFPVAAELISSLVDYLRSCEIDPFDAEDESA 229


>gi|256375780|ref|YP_003099440.1| hypothetical protein Amir_1645 [Actinosynnema mirum DSM 43827]
 gi|255920083|gb|ACU35594.1| hypothetical protein Amir_1645 [Actinosynnema mirum DSM 43827]
          Length = 406

 Score = 40.9 bits (94), Expect = 0.062,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 13/88 (14%)

Query: 74  ADIYDRPFGKVMVHPNRVMASNAETARNA------FLIDPNMLEFLWLRTIHEDKNIAKN 127
            +     FG + +  +R M  +A    +       FL+ P    F        ++ +AK 
Sbjct: 321 VERLLTDFGPINIMVDRAMPQDALLLTSLSQLKLQFLLIPGKGSFF-------EEPLAKT 373

Query: 128 GDANKGVLIGEGALKVRNEKAVGVVADL 155
           G +    + GE  L+  +  A GV+  L
Sbjct: 374 GASEDTQIYGEVGLEYGSPLAHGVLRGL 401


>gi|71657449|ref|XP_817240.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70882418|gb|EAN95389.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 757

 Score = 40.2 bits (92), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATA--D 75
           L  V+    +NG +   I   PY++    RF+S   +   R   +      T+ + A  D
Sbjct: 120 LVSVVIAILENGGDDAVIASGPYLEWYRSRFVSMDAIYGLRSTLNAVPPRATLSSAAEED 179

Query: 76  IYDRPFGKVMVHPNR-VMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIA 125
           +++   G  M+   R  +A     A        + L    +     +   A
Sbjct: 180 LFEGLLGPYMISIQRAFLAGLFPVAAELISSLVDYLRSCEIDPFDAEDESA 230


>gi|262067743|ref|ZP_06027355.1| hypothetical protein FUSPEROL_02025 [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378467|gb|EFE85985.1| hypothetical protein FUSPEROL_02025 [Fusobacterium periodonticum
           ATCC 33693]
          Length = 379

 Score = 39.0 bits (89), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 54/148 (36%), Gaps = 24/148 (16%)

Query: 7   DGTQRTFSKQILDEVMQEGYQNGDNFRH--------IIVSPYVKSEFVRFMSDSNVASFR 58
           D   + F+  +LD  ++     G N            +  PY+    +  ++  NV S  
Sbjct: 234 DANNQPFTLDLLDNAVKAIVDKG-NPGSANLKANKYFLCVPYLILRTINKLNKDNVRSNI 292

Query: 59  YATSGKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLI-DPNMLEFLWLRT 117
                 +    IV T+       G V V P          A N FL+   N +    L  
Sbjct: 293 TDKVTGTTIEQIVTTS-------GTVSVFP------ATSLAPNEFLLIHLNDVSLRQLYP 339

Query: 118 IHEDKNIAKNGDANKGVLIGEGALKVRN 145
           I E++  AK   A+   L GE A +++N
Sbjct: 340 IKEEEG-AKTALADNYFLHGEYAHQIKN 366


>gi|258590947|emb|CBE67242.1| conserved hypothetical protein; putative mxaE, involved in methanol
           dehydrogenase (mxaE2) [NC10 bacterium 'Dutch sediment']
          Length = 322

 Score = 38.6 bits (88), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 29  GDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYDRPFGKVMVHP 88
           G N R +  +P  K  +V    D  V+    A         ++AT  + +RP G V+ H 
Sbjct: 187 GANPRGVSFTPDGKRAYVGCERDGTVSVIDTAA------RRVIATIPVGERPVGTVVSHD 240

Query: 89  NRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK-NIAKNGDANKGVLIGEGALKV 143
            + +      +   +++D    + L      E    +A   D  +  +   G  +V
Sbjct: 241 GKKVYVAHGRSYEVWVLDTRTHQVLTKIPTQERSWWVALTPDGRELYVTVHGGGRV 296


>gi|194015203|ref|ZP_03053819.1| phage protein [Bacillus pumilus ATCC 7061]
 gi|194012607|gb|EDW22173.1| phage protein [Bacillus pumilus ATCC 7061]
          Length = 367

 Score = 37.9 bits (86), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 8/128 (6%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           ++ +M++ Y  G +   I+ +     +  +  +D  + + R   +     +T V+  D+ 
Sbjct: 232 INALMEQVYLRGGSVNTILTNTAGARQISKMATD-TIRTERTDAATGHRISTFVS--DMV 288

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIG 137
                 V+V PN      A   R+   + P     L  R++++        D     + G
Sbjct: 289 GGGVATVIVDPNFPKDKIALFDRSILSLHP-----LTGRSVYDTDASVPGADFVARQIRG 343

Query: 138 EGALKVRN 145
           E  +KV+N
Sbjct: 344 EYGIKVKN 351


>gi|300710357|ref|YP_003736171.1| phospholactate guanylyltransferase [Halalkalicoccus jeotgali B3]
 gi|299124040|gb|ADJ14379.1| phospholactate guanylyltransferase [Halalkalicoccus jeotgali B3]
          Length = 203

 Score = 37.5 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 17/140 (12%)

Query: 11  RTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTI 70
           R FS+ +L +V++   + G     +  +P                    A +      T 
Sbjct: 26  REFSRAMLGDVLESVREAGGEPEVLATAPLDVDTPATVDDRP----LTEAVNAALEPETA 81

Query: 71  VATAD-----------IYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIH 119
           V  AD           +++ P G V++ P R   +NA  +R       +     +L+   
Sbjct: 82  VVMADLPLLTAETIEGLFETP-GDVVLAPGRGGGTNALLSREP-EFRVDYHGGSFLKHRA 139

Query: 120 EDKNIAKNGDANKGVLIGEG 139
               I   G  +   L  + 
Sbjct: 140 SASEIGSVGVVDSHRLATDI 159


>gi|217076269|ref|YP_002333985.1| pyrimidine-nucleoside phosphorylase [Thermosipho africanus TCF52B]
 gi|217036122|gb|ACJ74644.1| pyrimidine-nucleoside phosphorylase [Thermosipho africanus TCF52B]
          Length = 434

 Score = 37.1 bits (84), Expect = 0.78,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 15/133 (11%)

Query: 28  NGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG-----KSHNNTIVATADIYDRPFG 82
            G     +   P  K+         NV  ++ A  G        +  I A  D       
Sbjct: 117 TGGTIDKLESIPGFKTSLSLEKFFENVNKYKIAVVGQTANLAPADKKIYALRDATAT-VD 175

Query: 83  KVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGALK 142
           ++ +  + +M+       +AF++D  +    +++ I   K +A          + E A K
Sbjct: 176 EISLIASSIMSKKLAGGADAFVLDVKVGSGAFMKDISSAKELASA--------MVEIA-K 226

Query: 143 VRNEKAVGVVADL 155
             N+ AV V+ ++
Sbjct: 227 SHNKTAVAVLTNM 239


>gi|294614769|ref|ZP_06694669.1| hypothetical protein EfmE1636_0859 [Enterococcus faecium E1636]
 gi|291592381|gb|EFF23990.1| hypothetical protein EfmE1636_0859 [Enterococcus faecium E1636]
          Length = 296

 Score = 36.3 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 4   KAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
           KA+  T    +++ +D + +  Y+ G     + +      E +       +         
Sbjct: 153 KAETATAGAVTRKDIDTLFKLMYEKGYMGEKLCLISPDMQELMT----DELDGKSTKIVQ 208

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                T           +G  +      +      A     ID N ++   LR     + 
Sbjct: 209 FGERVTFGLQIGNIVSNYGTGIALLEPSLPKGTIAA-----IDTNYVKLRPLREW-RAEE 262

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +AK  D+ +  L+GE +L+  N    G + +L
Sbjct: 263 LAKTTDSRRIGLVGEYSLE-YNASNSGAILNL 293


>gi|257893408|ref|ZP_05673061.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257829787|gb|EEV56394.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
          Length = 296

 Score = 36.3 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 4   KAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
           KA+  T    +++ +D + +  Y+ G     + +      E +       +         
Sbjct: 153 KAETATAGAVTRKDIDTLFKLMYEKGYMGEKLCLISPDMQELMT----DELDGKSTKIVQ 208

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                T           +G  +      +      A     ID N ++   LR     + 
Sbjct: 209 FGERVTFGLQIGNIVSNYGTGIALLEPSLPKGTIAA-----IDTNYVKLRPLREW-RAEE 262

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +AK  D+ +  L+GE +L+  N    G + +L
Sbjct: 263 LAKTTDSRRIGLVGEYSLE-YNASNSGAILNL 293


>gi|257883499|ref|ZP_05663152.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|261208026|ref|ZP_05922703.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289567093|ref|ZP_06447488.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|294622496|ref|ZP_06701518.1| conserved hypothetical protein [Enterococcus faecium U0317]
 gi|257819157|gb|EEV46485.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|260077743|gb|EEW65457.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161108|gb|EFD09013.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291598043|gb|EFF29153.1| conserved hypothetical protein [Enterococcus faecium U0317]
          Length = 296

 Score = 36.3 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 4   KAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
           KA+  T    +++ +D + +  Y+ G     + +      E +       +         
Sbjct: 153 KAETATAGAVTRKDIDTLFKLMYEKGYMGEKLCLISPDMQELMT----DELDGKSTKIVQ 208

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                T           +G  +      +      A     ID N ++   LR     + 
Sbjct: 209 FGERVTFGLQIGNIVSNYGTGIALLEPSLPKGTIAA-----IDTNYVKLRPLREW-RAEE 262

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +AK  D+ +  L+GE +L+  N    G + +L
Sbjct: 263 LAKTTDSRRIGLVGEYSLE-YNASNSGAILNL 293


>gi|257879565|ref|ZP_05659218.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257891545|ref|ZP_05671198.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|314940388|ref|ZP_07847550.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
 gi|314943205|ref|ZP_07849996.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
 gi|314949154|ref|ZP_07852509.1| conserved hypothetical protein [Enterococcus faecium TX0082]
 gi|314951966|ref|ZP_07854992.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
 gi|314993065|ref|ZP_07858455.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
 gi|314995396|ref|ZP_07860499.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
 gi|257813793|gb|EEV42551.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257827905|gb|EEV54531.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|313590399|gb|EFR69244.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
 gi|313592421|gb|EFR71266.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
 gi|313595906|gb|EFR74751.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
 gi|313598089|gb|EFR76934.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
 gi|313640428|gb|EFS05008.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
 gi|313644467|gb|EFS09047.1| conserved hypothetical protein [Enterococcus faecium TX0082]
          Length = 296

 Score = 35.9 bits (81), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 11/152 (7%)

Query: 4   KAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSG 63
           KA+  T    +++ +D + +  Y+ G     + +      E +       +         
Sbjct: 153 KAETATAGAVTRKDIDGLFKLMYEKGYMGEKLCLISPDMQELMT----DELDGKSTKIVQ 208

Query: 64  KSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKN 123
                T           +G  +      +      A     ID N ++   LR     + 
Sbjct: 209 FGERVTFGLQIGNIVSNYGTGIALLEPSLPKGTIAA-----IDTNYVKLRPLREW-RAEE 262

Query: 124 IAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
           +AK  D+ +  L+GE +L+  N    G + +L
Sbjct: 263 LAKTTDSRRIGLVGEYSLE-YNASNSGAILNL 293


>gi|114707526|ref|ZP_01440422.1| hypothetical protein FP2506_11672 [Fulvimarina pelagi HTCC2506]
 gi|114537085|gb|EAU40213.1| hypothetical protein FP2506_11672 [Fulvimarina pelagi HTCC2506]
          Length = 375

 Score = 35.9 bits (81), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 41/127 (32%), Gaps = 13/127 (10%)

Query: 16  QILDEVMQEGYQNGDNFRHIIVSPYVKSEFVR--FMSDSNVASFRYATSGKSHNNTIVAT 73
            ++DE + +   +      ++  P          F +D+           ++ +N IV  
Sbjct: 122 SMVDEALGQDLMSFGTPILVLGDPGQLPPVSGGGFFTDAEPDFLLTDIHRQARDNPIVKL 181

Query: 74  A-------DIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE----DK 122
           A        I    +G V V   R +      A +  L+  N     + R + E      
Sbjct: 182 ALDVREGRQIMHGDYGTVQVIGKRDVDQAKVLAVDQVLVGTNKTRRAYNRRLRELKGFTH 241

Query: 123 NIAKNGD 129
            + + GD
Sbjct: 242 ELPQVGD 248


>gi|257079386|ref|ZP_05573747.1| predicted protein [Enterococcus faecalis JH1]
 gi|256987416|gb|EEU74718.1| predicted protein [Enterococcus faecalis JH1]
          Length = 300

 Score = 35.6 bits (80), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 19/155 (12%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE-- 120
                  IV+    Y    G  ++ P       +  +     +D N +E   LR + E  
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVE---LRPVREWR 259

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            + +AK  D+ +  L+GE  ++  N    G + +L
Sbjct: 260 AEELAKTTDSKRIGLVGEYTIE-YNASNSGAILNL 293


>gi|307280635|ref|ZP_07561683.1| hypothetical protein HMPREF9515_01677 [Enterococcus faecalis
           TX0860]
 gi|306504001|gb|EFM73218.1| hypothetical protein HMPREF9515_01677 [Enterococcus faecalis
           TX0860]
          Length = 300

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 15/153 (9%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
                  IV+    Y    G  ++ P       +  +     +D N +E   LR     +
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVELRPLREW-RAE 261

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK  D+ +  L+GE  ++  N    G + +L
Sbjct: 262 ELAKTTDSKRIGLVGEYTIE-YNASNSGAILNL 293


>gi|307286482|ref|ZP_07566582.1| hypothetical protein HMPREF9505_00059 [Enterococcus faecalis
           TX0109]
 gi|306502395|gb|EFM71671.1| hypothetical protein HMPREF9505_00059 [Enterococcus faecalis
           TX0109]
          Length = 300

 Score = 35.2 bits (79), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 15/153 (9%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
                  IV+    Y    G  ++ P       +  +     +D N +E   LR     +
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVELRPLREW-RAE 261

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK  D+ +  L+GE  ++  N    G + +L
Sbjct: 262 ELAKTTDSKRIGLVGEYTIE-YNASNSGAILNL 293


>gi|315144740|gb|EFT88756.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
          Length = 300

 Score = 35.2 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 19/155 (12%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHE-- 120
                  IV+    Y    G  ++ P       +  +     +D N +E   LR + E  
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVE---LRPVREWR 259

Query: 121 DKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            + +AK  D+ +  L+GE  ++  N    G + +L
Sbjct: 260 AEELAKTTDSKRIGLVGEYTIE-YNASNSGAILNL 293


>gi|315173098|gb|EFU17115.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
          Length = 300

 Score = 34.8 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 102 AFLIDPNMLEFLWLRTIHEDKNIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
              +D N +E   LR     + +AK  D+ +  L+GE  ++  N    G + +L
Sbjct: 242 MIALDTNYVELRPLREW-RAEELAKTTDSKRIGLVGEYTIE-YNASNSGAILNL 293


>gi|307270079|ref|ZP_07551399.1| hypothetical protein HMPREF9498_02197 [Enterococcus faecalis
           TX4248]
 gi|306513574|gb|EFM82186.1| hypothetical protein HMPREF9498_02197 [Enterococcus faecalis
           TX4248]
          Length = 300

 Score = 34.4 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
                  IV+    Y    G  ++ P       +  +     +D N +E   LR     +
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVELRPLREW-RAE 261

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK  D+ +  L+GE +++  N    G + +L
Sbjct: 262 ELAKTTDSKRIGLVGEYSIE-YNASNSGAILNL 293


>gi|328725488|ref|XP_003248499.1| PREDICTED: probable NADP-dependent mannitol dehydrogenase-like,
           partial [Acyrthosiphon pisum]
          Length = 462

 Score = 34.0 bits (76), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 5/88 (5%)

Query: 19  DEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIYD 78
            E+++   + G +   I  +          ++       +   S     ++I AT D   
Sbjct: 259 LEIVRGLAEAGADVAIIYATSDNAPAIAAEVASQTNVKVQAYQSDVRRRDSIAATVDQIV 318

Query: 79  RPFGKVMVHPNRVMASNAETARNAFLID 106
             FG++ +     M +N+    +   ++
Sbjct: 319 SDFGRIDI-----MVANSGVCADVPALE 341


>gi|256956794|ref|ZP_05560965.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256947290|gb|EEU63922.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|295113775|emb|CBL32412.1| hypothetical protein [Enterococcus sp. 7L76]
 gi|315035894|gb|EFT47826.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
          Length = 300

 Score = 34.0 bits (76), Expect = 7.4,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 3   KKAKDGTQRTFSKQILDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATS 62
             A D   R    ++   +  +GY  G+    +              + + V +F    +
Sbjct: 156 TSAADAVTRKDVDKMFKTMFDKGY-AGEKLCLVSTDMVDLMTDEVDKAGTKVFNFGDQVA 214

Query: 63  GKSHNNTIVATADIYDRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDK 122
                  IV+    Y    G  ++ P       +  +     +D N +E   LR     +
Sbjct: 215 FGLQLGKIVSN---YGS--GTALIEP-------SLPSGTMIALDTNYVELRPLREW-RAE 261

Query: 123 NIAKNGDANKGVLIGEGALKVRNEKAVGVVADL 155
            +AK  D+ +  L+GE +++  N    G + +L
Sbjct: 262 ELAKTTDSKRIGLVGEYSIE-YNASNSGAILNL 293


>gi|308172834|ref|YP_003919539.1| phage protein [Bacillus amyloliquefaciens DSM 7]
 gi|307605698|emb|CBI42069.1| phage protein [Bacillus amyloliquefaciens DSM 7]
          Length = 367

 Score = 34.0 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 14/146 (9%)

Query: 18  LDEVMQEGYQNGDNFRHIIVSPYVKSEFVRFMSDSNVASFRYATSGKSHNNTIVATADIY 77
           ++ +M++ YQ G +   I+ +     +  +  +D+       A +G             +
Sbjct: 232 INALMEKVYQRGGSANTILTNTAGARQISKMATDTIRTERTDAATGHR--------VSTF 283

Query: 78  DRPFGKVMVHPNRVMASNAETARNAFLIDPNMLEFLWLRTIHEDKNIAKNGDAN--KGVL 135
                   V    V  +  +      L D ++L    L         A    A+     +
Sbjct: 284 VSDMVGGGVATVVVDPNFPK--DKIALFDRSILSLHPLNGRSVYDEDATVPGADFVARQI 341

Query: 136 IGEGALKVRNEKAVGVVADLFGLSKT 161
            GE  +KV+N  A   +A L  +S T
Sbjct: 342 RGEYGIKVKN--ANEKIAILENISTT 365


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.306    0.123    0.299 

Lambda     K      H
   0.267   0.0383    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,299,913,160
Number of Sequences: 13984884
Number of extensions: 73107684
Number of successful extensions: 180898
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 180739
Number of HSP's gapped (non-prelim): 129
length of query: 162
length of database: 4,792,584,752
effective HSP length: 123
effective length of query: 39
effective length of database: 3,072,444,020
effective search space: 119825316780
effective search space used: 119825316780
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 75 (33.6 bits)