RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.1078_1
         (62 letters)



>d1bev1_ b.121.4.1 (1:) Bovine enterovirus coat proteins {Bovine
          enterovirus, VG-5-27 [TaxId: 12064]}
          Length = 268

 Score = 22.8 bits (49), Expect = 7.3
 Identities = 4/27 (14%), Positives = 10/27 (37%)

Query: 35 SRYALMMKIFSISKPGYSSWKYTPRKV 61
           R +L+      +    + W+   R+ 
Sbjct: 63 GRSSLVGMPLLATGTSITHWRIDFREF 89


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.138    0.447 

Gapped
Lambda     K      H
   0.267   0.0663    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 266,200
Number of extensions: 9653
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 9
Length of query: 62
Length of database: 2,407,596
Length adjustment: 32
Effective length of query: 30
Effective length of database: 1,968,236
Effective search space: 59047080
Effective search space used: 59047080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.0 bits)