HHsearch alignment of GI: peg_1079 and MMDB domain: 2wbn_A_

>2wbn_A (A:) G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A
Probab=99.90  E-value=4.1e-24  Score=149.21  Aligned_cols=148  Identities=14%  Similarity=0.132  Sum_probs=121.2

Q ss_pred             HHHCCCHHHHHHHHCCCCE--EECCCEEECCCC-EEECCCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEE
Q ss_conf             9870897356433005100--101430000120-343156546567435752003774-871999999977399899994
Q 537021.9.peg.1   90 IIDSYPLHEREARTKGEPI--LGSGRIFPIVEE-DIVINSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVK  165 (251)
Q Consensus        90 ~~~~~~~~~~~~~~~G~~~--~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~d  165 (251)
                      .++.++++.|+++++|+|.  .++|.||..|++ .|++.++++++.+++++|+|||++ +|+|++++++++.++.+|+++
T Consensus         3 a~k~~dp~~y~~~~~G~~~~~~~~g~vy~~~~~~~~~i~~~~~~~~~~~~~g~D~G~~~~p~a~~~~~~~~~~~~~~i~~   82 (212)
T 2wbn_A            3 SSHHHHHHSSGLVPRGSHXALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAID   82 (212)
T ss_dssp             ------------------------CCSCTTEEECTTCSCHHHHHHCCCEEEEEECCBTTBCEEEEEEEEETTTTEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf             65444333456012687477515425058756852678867852356369977048998885899999978899899998


Q ss_pred             EHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             31025998799999998332487089726300111788888899999789747765777776777589989999998607
Q 537021.9.peg.1  166 NYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDRMRS  245 (251)
Q Consensus       166 e~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~~~~  245 (251)
                      |+|.+++++.++++.|+++++...      ....|++.++++.++++++|+++.++.   ++++++|.+||+.    |++
T Consensus        83 e~~~~~~~~~~~a~~l~~~~~~~~------~~~~D~A~~~~i~~l~~~~G~~~~~a~---k~~~~~i~~~~~~----l~~  149 (212)
T 2wbn_A           83 ELVDHKVSLKRTADFVRKNKYESA------RIIADSSEPRSIDALKLEHGINRIEGA---KKGPDSVEHGERW----LDE  149 (212)
T ss_dssp             EEEESSCCHHHHHHHHHHTTCTTS------CEEECTTCHHHHHHHHHTTCCTTEEEC---CSCGGGHHHHHHH----HHT
T ss_pred             EEEECCCCHHHHHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHCCCCEEECC---CCCCCHHHHHHHH----HHH
T ss_conf             602158899999999997456877------531458773258999986897653125---5587709999999----982


Q ss_pred             CCCEE
Q ss_conf             99078
Q 537021.9.peg.1  246 GRWKV  250 (251)
Q Consensus       246 grl~V  250 (251)
                      ++..+
T Consensus       150 ~~~~~  154 (212)
T 2wbn_A          150 LDAIV  154 (212)
T ss_dssp             SSEEE
T ss_pred             CCCEE
T ss_conf             78734