HHsearch alignment of GI: peg_1079 and MMDB domain: 2wbn_A_
>2wbn_A (A:) G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A
Probab=99.90 E-value=4.1e-24 Score=149.21 Aligned_cols=148 Identities=14% Similarity=0.132 Sum_probs=121.2
Q ss_pred HHHCCCHHHHHHHHCCCCE--EECCCEEECCCC-EEECCCCCCCCCCEEEEEECCCCC-CCCEEEEEEEECCCCEEEEEE
Q ss_conf 9870897356433005100--101430000120-343156546567435752003774-871999999977399899994
Q 537021.9.peg.1 90 IIDSYPLHEREARTKGEPI--LGSGRIFPIVEE-DIVINSLDIPEHWVQIGGMDFGWH-HPFAAGHLVWNRDSDVIYVVK 165 (251)
Q Consensus 90 ~~~~~~~~~~~~~~~G~~~--~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~g~D~G~~-~p~a~~~~~~~~~~~~~~i~d 165 (251)
.++.++++.|+++++|+|. .++|.||..|++ .|++.++++++.+++++|+|||++ +|+|++++++++.++.+|+++
T Consensus 3 a~k~~dp~~y~~~~~G~~~~~~~~g~vy~~~~~~~~~i~~~~~~~~~~~~~g~D~G~~~~p~a~~~~~~~~~~~~~~i~~ 82 (212)
T 2wbn_A 3 SSHHHHHHSSGLVPRGSHXALGSGVVPFENLQIEEGIITDAEVARFDNIRQGLDFGYGPDPLAFVRWHYDKRKNRIYAID 82 (212)
T ss_dssp ------------------------CCSCTTEEECTTCSCHHHHHHCCCEEEEEECCBTTBCEEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEECCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEE
T ss_conf 65444333456012687477515425058756852678867852356369977048998885899999978899899998
Q ss_pred EHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 31025998799999998332487089726300111788888899999789747765777776777589989999998607
Q 537021.9.peg.1 166 NYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRSGEQLSAQYRRQGMKMLPECATFDDGSNGVEAGISDMLDRMRS 245 (251)
Q Consensus 166 e~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~r~~G~~~~~~~~~~~kg~~sV~~GI~~l~~~~~~ 245 (251)
|+|.+++++.++++.|+++++... ....|++.++++.++++++|+++.++. ++++++|.+||+. |++
T Consensus 83 e~~~~~~~~~~~a~~l~~~~~~~~------~~~~D~A~~~~i~~l~~~~G~~~~~a~---k~~~~~i~~~~~~----l~~ 149 (212)
T 2wbn_A 83 ELVDHKVSLKRTADFVRKNKYESA------RIIADSSEPRSIDALKLEHGINRIEGA---KKGPDSVEHGERW----LDE 149 (212)
T ss_dssp EEEESSCCHHHHHHHHHHTTCTTS------CEEECTTCHHHHHHHHHTTCCTTEEEC---CSCGGGHHHHHHH----HHT
T ss_pred EEEECCCCHHHHHHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHCCCCEEECC---CCCCCHHHHHHHH----HHH
T ss_conf 602158899999999997456877------531458773258999986897653125---5587709999999----982
Q ss_pred CCCEE
Q ss_conf 99078
Q 537021.9.peg.1 246 GRWKV 250 (251)
Q Consensus 246 grl~V 250 (251)
++..+
T Consensus 150 ~~~~~ 154 (212)
T 2wbn_A 150 LDAIV 154 (212)
T ss_dssp SSEEE
T ss_pred CCCEE
T ss_conf 78734