HHsearch alignment of GI: peg_1079 and MMDB domain: 3c6a_A_
>3c6a_A (A:) Terminase large subunit; terminase nuclease, viral protein; 1.16A {Enterobacteria phage RB49} PDB: 3c6h_A
Probab=97.62 E-value=0.00013 Score=43.94 Aligned_cols=119 Identities=8% Similarity=-0.071 Sum_probs=76.3
Q ss_pred CCCCCCCEEEEEECCCC---CCCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEECCCC
Q ss_conf 54656743575200377---487199999997739989999431025998799999998332487089726300111788
Q 537021.9.peg.1 127 LDIPEHWVQIGGMDFGW---HHPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWLPWAWPHDGLQHDKRS 203 (251)
Q Consensus 127 ~~~~~~~~~~~g~D~G~---~~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 203 (251)
...++...+++|+|+.. +|.+|++++..+ ++.+|+++-+...+.+....++.+.+...... +....+.+++.
T Consensus 53 ~~~~~~~~~~~~~D~A~g~~~D~ta~~v~~~~--~~~~~~v~~~~~~~~~~~~~~~~i~~l~~~~~---~~~i~vE~~~~ 127 (232)
T 3c6a_A 53 EKPKEGRKYVATLDCSEGRGQDYHALQIIDIT--EFPYKQVAVYHSNTTSHFILPDIVFKYLMMYN---ECPVYIELNST 127 (232)
T ss_dssp SCCCTTCCEEEEEECCCSSSSCCEEEEEEECS--SSSEEEEEEEEESCCCTTTHHHHHHHHHHHTT---SCCEEEBCSHH
T ss_pred ECCCCCCEEEEEEECCCCCCCCCCEEEEEEEC--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEEECCC
T ss_conf 25899984999997478768887889999924--88704899981457688899999999998715---66299996785
Q ss_pred CCCHHHHHHHCCCEEE-----ECCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf 8888999997897477-----6577777677758998999999860799078
Q 537021.9.peg.1 204 GEQLSAQYRRQGMKML-----PECATFDDGSNGVEAGISDMLDRMRSGRWKV 250 (251)
Q Consensus 204 ~~s~~e~~r~~G~~~~-----~~~~~~~kg~~sV~~GI~~l~~~~~~grl~V 250 (251)
|..+++.+++...... .........+++.+..|..+..++++|++.+
T Consensus 128 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~K~~ri~~l~~~~e~g~i~i 179 (232)
T 3c6a_A 128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII 179 (232)
T ss_dssp HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE
T ss_conf 8999999989753773256555566743342009999999999997185498