HHsearch alignment of GI: peg_1079 and MMDB domain: 3cpe_A_146-383
>3cpe_A (A:146-383) Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A*
Probab=96.69 E-value=0.029 Score=31.20 Aligned_cols=104 Identities=11% Similarity=0.064 Sum_probs=67.4
Q ss_pred CCCCHHHHCCCCCCEEEEECCCC---HHHHHHHHHH--HCCCCCEEEEEECCCCCCCHHHHHH--CCCCCCCEEEEEEEH
Q ss_conf 33696550333135899818989---7499886311--2475873999924899987565564--036799759999771
Q 537021.9.peg.1 4 YEQGRDKWQSNTVHYVWFDEEPP---EDVYFEGLTR--INATQGLVTLTLTPLKGRSPIIEHY--LSASSSDRQVIRMTI 76 (251)
Q Consensus 4 ~~q~~~~~~G~~~~~i~~DE~~~---~~~~~~~~~r--~~~~~g~i~~~~nP~~~~~~~~~~~--~~~~~~~~~~~~~t~ 76 (251)
..+.+..++|..++.+++||+.. ...+...+.. ...+...+.+++||... ..++..+ ..............+
T Consensus 117 ~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~~l~sTp~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 195 (238)
T 3cpe_A 117 YASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGL-NHFYDIWTAAVEGKSGFEPYTAIW 195 (238)
T ss_dssp EECCHHHHHHSCCSEEEEETGGGCTTHHHHHHHHHHHHSSSSCCEEEEEECCCTT-SHHHHHHHHHHTTCSSCEEEEECG
T ss_pred CCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHCCCCCCCEECCC
T ss_conf 1688877667655405864122064056555310344436887269997899776-520688988742876567422442
Q ss_pred HHCCCC----------CHHHHHHHHHCCCHHHHHHHHCCCCE
Q ss_conf 334668----------89999999870897356433005100
Q 537021.9.peg.1 77 NETPHY----------NEQERKRIIDSYPLHEREARTKGEPI 108 (251)
Q Consensus 77 ~DNp~l----------~~~~~~~~~~~~~~~~~~~~~~G~~~ 108 (251)
.+.+.. ....++.....++++.++++++|.|.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (238)
T 3cpe_A 196 NSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFE 237 (238)
T ss_dssp GGSGGGGBCTTSBBCTTHHHHHHHHTTSCHHHHHHHHSCCCT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEC
T ss_conf 336763455432100457899999845774442235441121