HHsearch alignment of GI: peg_1079 and MMDB domain: 3cpe_A_146-383

>3cpe_A (A:146-383) Terminase, DNA packaging protein GP17; large terminase, alternative initiation, ATP-binding, DNA- binding, hydrolase, nuclease; HET: DNA; 2.80A {Bacteriophage T4} PDB: 3ezk_A*
Probab=96.69  E-value=0.029  Score=31.20  Aligned_cols=104  Identities=11%  Similarity=0.064  Sum_probs=67.4

Q ss_pred             CCCCHHHHCCCCCCEEEEECCCC---HHHHHHHHHH--HCCCCCEEEEEECCCCCCCHHHHHH--CCCCCCCEEEEEEEH
Q ss_conf             33696550333135899818989---7499886311--2475873999924899987565564--036799759999771
Q 537021.9.peg.1    4 YEQGRDKWQSNTVHYVWFDEEPP---EDVYFEGLTR--INATQGLVTLTLTPLKGRSPIIEHY--LSASSSDRQVIRMTI   76 (251)
Q Consensus         4 ~~q~~~~~~G~~~~~i~~DE~~~---~~~~~~~~~r--~~~~~g~i~~~~nP~~~~~~~~~~~--~~~~~~~~~~~~~t~   76 (251)
                      ..+.+..++|..++.+++||+..   ...+...+..  ...+...+.+++||... ..++..+  ..............+
T Consensus       117 ~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~~l~sTp~~~-~~~~~~~~~~~~~~~~~~~~~~~~  195 (238)
T 3cpe_A          117 YASSPDAVRGNSFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSKIIITTTPNGL-NHFYDIWTAAVEGKSGFEPYTAIW  195 (238)
T ss_dssp             EECCHHHHHHSCCSEEEEETGGGCTTHHHHHHHHHHHHSSSSCCEEEEEECCCTT-SHHHHHHHHHHTTCSSCEEEEECG
T ss_pred             CCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHCCCCCCCEECCC
T ss_conf             1688877667655405864122064056555310344436887269997899776-520688988742876567422442


Q ss_pred             HHCCCC----------CHHHHHHHHHCCCHHHHHHHHCCCCE
Q ss_conf             334668----------89999999870897356433005100
Q 537021.9.peg.1   77 NETPHY----------NEQERKRIIDSYPLHEREARTKGEPI  108 (251)
Q Consensus        77 ~DNp~l----------~~~~~~~~~~~~~~~~~~~~~~G~~~  108 (251)
                      .+.+..          ....++.....++++.++++++|.|.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (238)
T 3cpe_A          196 NSVKERLYNDEDIFDDGWQWSIQTINGSSLAQFRQEHTAAFE  237 (238)
T ss_dssp             GGSGGGGBCTTSBBCTTHHHHHHHHTTSCHHHHHHHHSCCCT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEC
T ss_conf             336763455432100457899999845774442235441121