HHsearch results for GI: peg_1079 and protein with PDBid: 3c6a_A
>3c6a_A Terminase large subunit; terminase nuclease, viral protein; 1.16A {Enterobacteria phage RB49} PDB: 3c6h_A
Probab=94.09 E-value=0.064 Score=28.50 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=68.0
Q ss_pred CCCCCEEEEEECC--CCC-CCCEEEEEEEECCCCEEEEEEEHHHCCCCHHHHHHHHHHCCCCC--EEEECCCCCEECCCC
Q ss_conf 6567435752003--774-87199999997739989999431025998799999998332487--089726300111788
Q 537021.9.peg.1 129 IPEHWVQIGGMDF--GWH-HPFAAGHLVWNRDSDVIYVVKNYRCREQTPIFHVAALKSWGKWL--PWAWPHDGLQHDKRS 203 (251)
Q Consensus 129 ~~~~~~~~~g~D~--G~~-~p~a~~~~~~~~~~~~~~i~de~~~~~~t~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~ 203 (251)
+.+...+++|+|. |.. |.+|+.++ |-.......+.+|+....++..+++.|.+.+... ..+ .+..++.
T Consensus 55 P~~g~~YvigvD~A~G~g~DyS~i~V~--Dvt~~~~~qVA~~r~n~i~p~~~a~ii~~i~~~Yn~a~v-----~vE~Nn~ 127 (232)
T 3c6a_A 55 PKEGRKYVATLDCSEGRGQDYHALQII--DITEFPYKQVAVYHSNTTSHFILPDIVFKYLMMYNECPV-----YIELNST 127 (232)
T ss_dssp CCTTCCEEEEEECCCSSSSCCEEEEEE--ECSSSSEEEEEEEEESCCCTTTHHHHHHHHHHHTTSCCE-----EEBCSHH
T ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEE--ECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE-----EEEECCC
T ss_conf 899984999997478768887879999--767987148999740366878999999999987055739-----9997786
Q ss_pred CCCHHHHHH-HCCCE-EEEC---CCCCCCCCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf 888899999-78974-7765---77777677758998999999860799078
Q 537021.9.peg.1 204 GEQLSAQYR-RQGMK-MLPE---CATFDDGSNGVEAGISDMLDRMRSGRWKV 250 (251)
Q Consensus 204 ~~s~~e~~r-~~G~~-~~~~---~~~~~kg~~sV~~GI~~l~~~~~~grl~V 250 (251)
|..+++.++ +.+.. +... .......+.+...+|..++.++++++++|
T Consensus 128 G~~v~~~l~~~~~Y~Nl~~~~~~~~Gf~TT~~sK~~~~~~Lk~lie~~~l~i 179 (232)
T 3c6a_A 128 GVSIAKSLAMDLEYDNIICDSFIDLGMKQSKRSKAMGCSALKDLIEKDKLII 179 (232)
T ss_dssp HHHHHHHHHHTSCCCCBCCSBTTBSSBCCCHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEE
T ss_conf 7999999988744773024244566744342019999999999997185498