Query 537021.9.peg.1080_1
Match_columns 110
No_of_seqs 50 out of 52
Neff 3.6
Searched_HMMs 13730
Date Wed May 25 06:28:39 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1080.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1swga_ b.61.1.1 (A:) Streptav 33.6 1.9 0.00014 21.5 -1.7 27 18-44 3-45 (126)
2 d1kjwa1 b.34.2.1 (A:430-525) P 31.1 6.5 0.00047 18.4 0.7 13 24-36 38-50 (96)
3 d1vyua1 b.34.2.1 (A:39-174) SH 27.4 7.4 0.00054 18.0 0.4 21 23-43 61-82 (136)
4 d1vyva1 b.34.2.1 (A:71-215) SH 24.8 8.4 0.00061 17.7 0.3 20 24-43 62-82 (145)
5 d1t0ha_ b.34.2.1 (A:) SH3-like 19.6 13 0.00092 16.7 0.4 13 22-34 58-70 (96)
6 d2daqa1 b.34.9.2 (A:8-104) His 18.6 17 0.0012 15.9 0.8 15 22-37 13-27 (97)
7 d1zq1a1 b.38.3.1 (A:2-75) Glut 14.3 31 0.0023 14.4 1.3 21 88-108 41-61 (74)
8 d2d6fa1 b.38.3.1 (A:2-73) Glut 14.2 35 0.0025 14.1 1.5 23 87-109 40-62 (72)
9 d1dnla_ b.45.1.1 (A:) Pyridoxi 12.1 26 0.0019 14.8 0.4 34 71-107 29-62 (199)
10 d1myna_ g.3.7.4 (A:) Drosomyci 11.3 21 0.0015 15.4 -0.3 22 32-57 6-27 (44)
No 1
>d1swga_ b.61.1.1 (A:) Streptavidin {Streptomyces avidinii [TaxId: 1895]}
Probab=33.61 E-value=1.9 Score=21.50 Aligned_cols=27 Identities=30% Similarity=0.506 Sum_probs=20.3
Q ss_pred HHHHCCCCCC---------------C-CCEEECCCCEEEEECC
Q ss_conf 9863899850---------------1-7545557727999414
Q 537021.9.peg.1 18 MHLSGCYPSW---------------W-RGYRFLQPIVMVAGSV 44 (110)
Q Consensus 18 ~HlTG~YP~W---------------W-~G~RF~~Pi~aWa~g~ 44 (110)
|||+|+|-.| | .|.+|.+.+..|.|--
T Consensus 3 y~l~Gry~~~P~~~g~g~TFGFtV~W~ng~~~~~StT~WtGQC 45 (126)
T d1swga_ 3 YVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWSGQY 45 (126)
T ss_dssp EEEEEEECSSCCSSSCCEEEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEE
T ss_conf 0351054357898999762899999607854452032666777
No 2
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.13 E-value=6.5 Score=18.37 Aligned_cols=13 Identities=23% Similarity=0.716 Sum_probs=9.6
Q ss_pred CCCCCCCEEECCC
Q ss_conf 9850175455577
Q 537021.9.peg.1 24 YPSWWRGYRFLQP 36 (110)
Q Consensus 24 YP~WW~G~RF~~P 36 (110)
-++||+|++.+.+
T Consensus 38 d~~WW~~~~~~~~ 50 (96)
T d1kjwa1 38 DEEWWQARRVHSD 50 (96)
T ss_dssp SSSEEEEEECCSS
T ss_pred CCCEEEEEECCCC
T ss_conf 6750899976678
No 3
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.41 E-value=7.4 Score=18.03 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=13.6
Q ss_pred CCCCCCCCEEECCC-CEEEEEC
Q ss_conf 99850175455577-2799941
Q 537021.9.peg.1 23 CYPSWWRGYRFLQP-IVMVAGS 43 (110)
Q Consensus 23 ~YP~WW~G~RF~~P-i~aWa~g 43 (110)
..++||+||..+.. -..+.-+
T Consensus 61 ~d~~WW~~r~~~~~~~~G~iPs 82 (136)
T d1vyua1 61 YSNDWWIGRLVKEGGDIAFIPS 82 (136)
T ss_dssp CSSSEEEEEESSTTCCCEEEEC
T ss_pred CCCCCEEEEECCCCCCEECCCC
T ss_conf 5898077886267883403574
No 4
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.84 E-value=8.4 Score=17.71 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=13.9
Q ss_pred CCCCCCCEEECC-CCEEEEEC
Q ss_conf 985017545557-72799941
Q 537021.9.peg.1 24 YPSWWRGYRFLQ-PIVMVAGS 43 (110)
Q Consensus 24 YP~WW~G~RF~~-Pi~aWa~g 43 (110)
.++||+|++..+ --..|.-+
T Consensus 62 d~~WW~gr~~~~~g~~G~iPS 82 (145)
T d1vyva1 62 NNDWWIGRLVKEGCEIGFIPS 82 (145)
T ss_dssp ETTEEEEEESSTTCCCEEEEC
T ss_pred CCCCEEEEECCCCCCEEEECC
T ss_conf 898088898578996657577
No 5
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=19.65 E-value=13 Score=16.69 Aligned_cols=13 Identities=23% Similarity=0.588 Sum_probs=8.8
Q ss_pred CCCCCCCCCEEEC
Q ss_conf 8998501754555
Q 537021.9.peg.1 22 GCYPSWWRGYRFL 34 (110)
Q Consensus 22 G~YP~WW~G~RF~ 34 (110)
-.-++||+|+...
T Consensus 58 ~~d~~WW~gr~~~ 70 (96)
T d1t0ha_ 58 KFNNDWWIGRLVK 70 (96)
T ss_dssp ECSSSEEEEEESS
T ss_pred EECCCCEEEEECC
T ss_conf 2079916889767
No 6
>d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase NSD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.57 E-value=17 Score=15.94 Aligned_cols=15 Identities=27% Similarity=0.621 Sum_probs=11.8
Q ss_pred CCCCCCCCCEEECCCC
Q ss_conf 8998501754555772
Q 537021.9.peg.1 22 GCYPSWWRGYRFLQPI 37 (110)
Q Consensus 22 G~YP~WW~G~RF~~Pi 37 (110)
+.|| ||-|+..+.|-
T Consensus 13 ~g~p-wWPa~V~~~~~ 27 (97)
T d2daqa1 13 GNYR-WWPAEICNPRS 27 (97)
T ss_dssp SSSC-EEEEEECCTTT
T ss_pred CCCC-CCCEEECCHHH
T ss_conf 8968-99657718777
No 7
>d1zq1a1 b.38.3.1 (A:2-75) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=14.35 E-value=31 Score=14.39 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=18.3
Q ss_pred CCCEEEEEEEECCCCEEEEEE
Q ss_conf 970269999705881378987
Q 537021.9.peg.1 88 GAYSTVTVRHLSGRDIGFIIE 108 (110)
Q Consensus 88 navd~v~VrH~SGg~~~~~~~ 108 (110)
...+.+++|-.+|=|+||..+
T Consensus 41 s~~~~ivlKL~nGYNiGi~~~ 61 (74)
T d1zq1a1 41 SAGDTLVLKLENGYNIGIALE 61 (74)
T ss_dssp CCCSEEEEEETTSCEEEEEGG
T ss_pred CCCCEEEEEECCCEEECCCHH
T ss_conf 899879999448622413366
No 8
>d2d6fa1 b.38.3.1 (A:2-73) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=14.21 E-value=35 Score=14.11 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=19.3
Q ss_pred CCCCEEEEEEEECCCCEEEEEEE
Q ss_conf 99702699997058813789870
Q 537021.9.peg.1 87 AGAYSTVTVRHLSGRDIGFIIES 109 (110)
Q Consensus 87 pnavd~v~VrH~SGg~~~~~~~s 109 (110)
....+++++|-.||=|+||.++-
T Consensus 40 ~sd~~~iVlKL~nGYNiGi~~~~ 62 (72)
T d2d6fa1 40 DADDRHIVLKLENGYNIGVEISD 62 (72)
T ss_dssp TSCSSEEEEECTTSCEEEEECTT
T ss_pred CCCCCEEEEEECCCEEEEEECCC
T ss_conf 58999899992486447263353
No 9
>d1dnla_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Escherichia coli [TaxId: 562]}
Probab=12.14 E-value=26 Score=14.85 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=23.8
Q ss_pred CCCHHHHCCCEECCCCCCCCEEEEEEEECCCCEEEEE
Q ss_conf 0357775001453799997026999970588137898
Q 537021.9.peg.1 71 MIPANKVLNMTRRSNIAGAYSTVTVRHLSGRDIGFII 107 (110)
Q Consensus 71 ~IP~~~I~~ttr~~Gvpnavd~v~VrH~SGg~~~~~~ 107 (110)
.-|-.+.+.|.-+.|.|.+ ++|++|+++.. ||+|
T Consensus 29 ~~p~A~~LATvd~~g~P~~-RtV~lr~~~~~--g~~F 62 (199)
T d1dnla_ 29 ADPTAMVVATVDEHGQPYQ-RIVLLKHYDEK--GMVF 62 (199)
T ss_dssp SCTTEEEEEEECTTSCEEE-EEEECCEEETT--EEEE
T ss_pred CCCCEEEEEEECCCCCEEC-CEEEHHHCCCC--CEEE
T ss_conf 9987789998879998700-12432023168--4499
No 10
>d1myna_ g.3.7.4 (A:) Drosomycin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=11.35 E-value=21 Score=15.37 Aligned_cols=22 Identities=18% Similarity=0.114 Sum_probs=15.7
Q ss_pred EECCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf 55577279994145325787656665
Q 537021.9.peg.1 32 RFLQPIVMVAGSVTYELTRDGIQRLL 57 (110)
Q Consensus 32 RF~~Pi~aWa~g~t~E~tRDivQ~~L 57 (110)
||.-|--+| ++|+.|++++.|=
T Consensus 6 ~~~GpC~~W----~~e~CRr~C~eEG 27 (44)
T d1myna_ 6 RYKGPCAVW----DNETCRRVCKEEG 27 (44)
T ss_dssp SCCSCCCTT----THHHHHHHHHHHT
T ss_pred CCCCCEEEE----CCHHHHHHHHHHC
T ss_conf 507754541----6589999999709
Done!