Query 537021.9.peg.1086_1
Match_columns 38
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 05:46:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1086.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3d85d1 b.1.1.4 (D:1-87) The p 12.3 38 0.0027 15.1 1.2 11 22-32 59-70 (87)
2 d1xg8a_ c.47.1.17 (A:) Hypothe 12.2 15 0.0011 17.1 -0.8 23 3-25 13-35 (111)
3 d1hi7a_ g.16.1.1 (A:) PNR-2/PS 9.1 50 0.0037 14.4 1.0 20 8-27 3-22 (60)
4 d1xpna_ b.3.7.1 (A:) Hypotheti 7.5 71 0.0051 13.7 1.2 27 11-37 43-69 (170)
5 d1e9ta_ g.16.1.1 (A:) Intestin 7.2 55 0.004 14.2 0.5 22 6-27 5-26 (59)
6 d1vg0a1 c.3.1.3 (A:3-444,A:558 6.1 62 0.0045 13.9 0.3 17 18-35 383-399 (491)
7 d2pspa2 g.16.1.1 (A:54-106) Pa 6.0 73 0.0053 13.6 0.6 19 9-27 2-20 (53)
8 d2jn4a1 b.173.1.1 (A:1-66) Unc 5.4 97 0.007 13.0 0.9 15 19-33 29-43 (66)
9 d2d9qb1 b.1.1.3 (B:3-96) Granu 4.8 1.2E+02 0.0085 12.5 1.0 10 8-17 17-26 (94)
10 d1viba_ g.2.2.1 (A:) Neurotoxi 4.8 67 0.0049 13.8 -0.2 8 21-28 2-9 (55)
No 1
>d3d85d1 b.1.1.4 (D:1-87) The p40 domain of interleukin-12 (IL-12 beta chain), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.25 E-value=38 Score=15.06 Aligned_cols=11 Identities=45% Similarity=0.730 Sum_probs=7.9
Q ss_pred CCCC-CEEEEEE
Q ss_conf 2335-1656640
Q 537021.9.peg.1 22 ESWG-GIYTCFN 32 (38)
Q Consensus 22 eswg-giytcfn 32 (38)
|+++ |-|||++
T Consensus 59 E~~~aGnYTChk 70 (87)
T d3d85d1 59 EFGDAGQYTCHK 70 (87)
T ss_dssp SGGGCEEEEEEE
T ss_pred ECCCCCCEEEEC
T ss_conf 505775316807
No 2
>d1xg8a_ c.47.1.17 (A:) Hypothetical protein SA0798 {Staphylococcus aureus [TaxId: 1280]}
Probab=12.25 E-value=15 Score=17.08 Aligned_cols=23 Identities=35% Similarity=0.631 Sum_probs=18.7
Q ss_pred CCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 22211331000065321222335
Q 537021.9.peg.1 3 YKNAMVSASCSIAPESRRSESWG 25 (38)
Q Consensus 3 yknamvsascsiapesrrseswg 25 (38)
|-...+-|||--+|.|.....|-
T Consensus 13 YGA~~iCASCV~aPSSkeTyEWL 35 (111)
T d1xg8a_ 13 YGADVICASCVNAPTSKDIYDWL 35 (111)
T ss_dssp EECSSCCGGGSSSCCHHHHHHHH
T ss_pred ECCCCCCHHHCCCCCCHHHHHHH
T ss_conf 74454045432899724189999
No 3
>d1hi7a_ g.16.1.1 (A:) PNR-2/PS2, TFF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.06 E-value=50 Score=14.41 Aligned_cols=20 Identities=25% Similarity=0.740 Sum_probs=15.1
Q ss_pred EEEEECCCCCCCCCCCCCCE
Q ss_conf 33100006532122233516
Q 537021.9.peg.1 8 VSASCSIAPESRRSESWGGI 27 (38)
Q Consensus 8 vsascsiapesrrseswggi 27 (38)
-+.+|++.+..|..=.|-||
T Consensus 3 ~~~~C~V~~~~R~dCg~~gi 22 (60)
T d1hi7a_ 3 QTETCTVAPRERQNCGFPGV 22 (60)
T ss_dssp CEEECCCCTTTSCEEECTTC
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 67613588565505798897
No 4
>d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=7.48 E-value=71 Score=13.67 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=16.1
Q ss_pred EECCCCCCCCCCCCCCEEEEEECEEEE
Q ss_conf 000065321222335165664024871
Q 537021.9.peg.1 11 SCSIAPESRRSESWGGIYTCFNRTIQL 37 (38)
Q Consensus 11 scsiapesrrseswggiytcfnrtiql 37 (38)
+-+|.-.-.-..+=|+|++|-+..|.|
T Consensus 43 ~~tI~G~~~~~~~~g~ivtcaGt~V~L 69 (170)
T d1xpna_ 43 GGVINGDLYLTSASGAIQKGTNTKVAL 69 (170)
T ss_dssp CCCEEEEECEECTTSCEECCTTEEEEE
T ss_pred CCEEEEEEEEECCCCCEEECCCCEEEE
T ss_conf 756755799985899788468988999
No 5
>d1e9ta_ g.16.1.1 (A:) Intestinal trefoil factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.22 E-value=55 Score=14.21 Aligned_cols=22 Identities=9% Similarity=0.397 Sum_probs=17.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCE
Q ss_conf 1133100006532122233516
Q 537021.9.peg.1 6 AMVSASCSIAPESRRSESWGGI 27 (38)
Q Consensus 6 amvsascsiapesrrseswggi 27 (38)
++....|++.+..|..=.|.||
T Consensus 5 ~~~~~~C~v~~~~R~dCg~~gi 26 (59)
T d1e9ta_ 5 GLSANQCAVPAKDRVDCGYPHV 26 (59)
T ss_dssp CCSSGGGCCCSTTCCCCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 6487754588454605798897
No 6
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.07 E-value=62 Score=13.94 Aligned_cols=17 Identities=29% Similarity=0.741 Sum_probs=8.9
Q ss_pred CCCCCCCCCEEEEEECEE
Q ss_conf 212223351656640248
Q 537021.9.peg.1 18 SRRSESWGGIYTCFNRTI 35 (38)
Q Consensus 18 srrseswggiytcfnrti 35 (38)
+|.+.-|||+|- .|+.|
T Consensus 383 cR~~AV~Gg~Y~-L~~~i 399 (491)
T d1vg0a1 383 CRMCAVFGGIYC-LRHSV 399 (491)
T ss_dssp HHHHHHTTCEEE-SSCCE
T ss_pred HHHHHHCCCEEE-CCCCC
T ss_conf 999884496898-68843
No 7
>d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}
Probab=6.04 E-value=73 Score=13.59 Aligned_cols=19 Identities=26% Similarity=0.588 Sum_probs=14.3
Q ss_pred EEEECCCCCCCCCCCCCCE
Q ss_conf 3100006532122233516
Q 537021.9.peg.1 9 SASCSIAPESRRSESWGGI 27 (38)
Q Consensus 9 sascsiapesrrseswggi 27 (38)
+..|++.|..|..=.|.||
T Consensus 2 s~~C~v~~~~R~dCg~~gi 20 (53)
T d2pspa2 2 SEECVMQVSARKNCGYPGI 20 (53)
T ss_dssp SGGGCCCGGGCCBCSCTTC
T ss_pred CCCCCCCCCCCCCCCCCCC
T ss_conf 7622488665604698998
No 8
>d2jn4a1 b.173.1.1 (A:1-66) Uncharacterized protein FixU (NifT) {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=5.36 E-value=97 Score=12.97 Aligned_cols=15 Identities=33% Similarity=0.550 Sum_probs=11.0
Q ss_pred CCCCCCCCEEEEEEC
Q ss_conf 122233516566402
Q 537021.9.peg.1 19 RRSESWGGIYTCFNR 33 (38)
Q Consensus 19 rrseswggiytcfnr 33 (38)
...+.|||..|--|-
T Consensus 29 e~~~~wGG~vtL~NG 43 (66)
T d2jn4a1 29 ENPALWGGKVTLANG 43 (66)
T ss_dssp SSSSSCSSEEEETTS
T ss_pred ECCCCCCCEEEECCC
T ss_conf 537755888996796
No 9
>d2d9qb1 b.1.1.3 (B:3-96) Granulocyte colony-stimulating factor (GC-SF) receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.82 E-value=1.2e+02 Score=12.55 Aligned_cols=10 Identities=40% Similarity=0.773 Sum_probs=0.0
Q ss_pred EEEEECCCCC
Q ss_conf 3310000653
Q 537021.9.peg.1 8 VSASCSIAPE 17 (38)
Q Consensus 8 vsascsiape 17 (38)
+.|||.|.+.
T Consensus 17 ~tAsC~I~e~ 26 (94)
T d2d9qb1 17 ITASCIIKQN 26 (94)
T ss_dssp EEEEECCCTT
T ss_pred EEEEEEECCC
T ss_conf 8899998741
No 10
>d1viba_ g.2.2.1 (A:) Neurotoxin B-IV {Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]}
Probab=4.78 E-value=67 Score=13.78 Aligned_cols=8 Identities=50% Similarity=1.331 Sum_probs=0.0
Q ss_pred CCCCCCEE
Q ss_conf 22335165
Q 537021.9.peg.1 21 SESWGGIY 28 (38)
Q Consensus 21 seswggiy 28 (38)
|..|||-|
T Consensus 2 s~twg~~y 9 (55)
T d1viba_ 2 SATWGAAY 9 (55)
T ss_dssp CCCCSTTT
T ss_pred CCCCCCCC
T ss_conf 66334647
Done!