Query         537021.9.peg.1087_1
Match_columns 48
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 23785
Date          Wed May 25 06:44:03 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_1087.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3dac_P Cellular tumor antigen   25.0     7.6 0.00032   19.1  -1.1   16   28-43      5-20  (26)
  2 2k8f_B Cellular tumor antigen   10.0      23 0.00098   16.8  -1.7   14   29-42     22-35  (39)
  3 1zxh_A Immunoglobulin G bindin   6.2      56  0.0024   15.0  -1.1   14   12-25     18-31  (56)
  4 2pka_A Kallikrein A; serine pr   5.2   2E+02  0.0084   12.4   1.3   17   21-37     26-42  (80)
  5 3eps_A Isocitrate dehydrogenas   4.9 1.2E+02  0.0052   13.4  -0.0   29   14-46    398-426 (578)
  6 2l14_B Cellular tumor antigen    4.5      55  0.0023   15.0  -2.1   14   29-42     10-23  (49)
  7 2g7j_A Putative cytoplasmic pr   3.8 2.3E+02  0.0096   12.1   0.6   15   16-30     41-55  (124)
  8 3bbo_1 Ribosomal protein L31;    3.5 1.6E+02  0.0067   12.9  -0.4   22    9-30     25-57  (144)
  9 1xru_A 4-deoxy-L-threo-5-hexos   3.4      79  0.0033   14.3  -2.1   26    1-26      4-29  (282)
 10 2ww6_A Fibritin, T4 fibritin;    3.3 2.5E+02    0.01   11.9   0.5    6   29-34     19-24  (27)

No 1  
>3dac_P Cellular tumor antigen P53; MDMX, MDM4, HDMX, HDM4, MDM-4, MDM-X, MDM2, HDM2, nucleus, oncogene, apoptosis, cell cycle, disease mutation; 1.80A {Danio rerio}
Probab=24.99  E-value=7.6  Score=19.10  Aligned_cols=16  Identities=50%  Similarity=0.891  Sum_probs=13.0

Q ss_pred             CEEEEECCCCCEEEEE
Q ss_conf             2389986755110033
Q 537021.9.peg.1   28 PKWILLSPNNVMAPLN   43 (48)
Q Consensus        28 pkwillspnnvmapln   43 (48)
                      .-|-||..|||..||-
T Consensus         5 dlwkllpennvlsplp   20 (26)
T 3dac_P            5 DLWKLLPENNVLSPLP   20 (26)
T ss_pred             HHHHHCCCCCCCCCCC
T ss_conf             8998775457567786


No 2  
>2k8f_B Cellular tumor antigen P53; complex of P53 and P300, acetylation, bromodomain, cell cycle, chromosomal rearrangement, citrullination; NMR {Homo sapiens}
Probab=9.99  E-value=23  Score=16.82  Aligned_cols=14  Identities=57%  Similarity=1.056  Sum_probs=11.3

Q ss_pred             EEEEECCCCCEEEE
Q ss_conf             38998675511003
Q 537021.9.peg.1   29 KWILLSPNNVMAPL   42 (48)
Q Consensus        29 kwillspnnvmapl   42 (48)
                      -|-||.+|||..++
T Consensus        22 LWkLLP~nnvLs~~   35 (39)
T 2k8f_B           22 LWKLLPENNVLSPL   35 (39)
T ss_dssp             HHHTCSSSCCCCCC
T ss_pred             HHHHCCCCCCCCCC
T ss_conf             99867843345657


No 3  
>1zxh_A Immunoglobulin G binding protein G; IGG-binding, phage display, immune system/protein binding complex; NMR {Streptococcus SP}
Probab=6.22  E-value=56  Score=15.00  Aligned_cols=14  Identities=64%  Similarity=0.805  Sum_probs=11.5

Q ss_pred             EEECCCCCCCCEEE
Q ss_conf             23135310021566
Q 537021.9.peg.1   12 VMASNAETARNAFL   25 (48)
Q Consensus        12 vmasnaetarnafl   25 (48)
                      -+|-.|+++|+.|.
T Consensus        18 t~avdaataek~Fk   31 (56)
T 1zxh_A           18 TKAVDAETARNAFI   31 (56)
T ss_dssp             EECSSHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHH
T ss_conf             12014789999999


No 4  
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=5.15  E-value=2e+02  Score=12.38  Aligned_cols=17  Identities=29%  Similarity=0.759  Sum_probs=11.8

Q ss_pred             CCEEEECCEEEEECCCC
Q ss_conf             21566532389986755
Q 537021.9.peg.1   21 RNAFLIHPKWILLSPNN   37 (48)
Q Consensus        21 rnaflihpkwillspnn   37 (48)
                      -.+-||.+.|+|-.-.-
T Consensus        26 CgGsLI~~~~VLTAAHC   42 (80)
T 2pka_A           26 CGGVLVNPKWVLTAAHC   42 (80)
T ss_dssp             EEEEEEETTEEEECGGG
T ss_pred             EEEEEECCCCEEEEEEE
T ss_conf             98999456008991675


No 5  
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=4.88  E-value=1.2e+02  Score=13.37  Aligned_cols=29  Identities=28%  Similarity=0.492  Sum_probs=17.4

Q ss_pred             ECCCCCCCCEEEECCEEEEECCCCCEEEEEEEE
Q ss_conf             135310021566532389986755110033566
Q 537021.9.peg.1   14 ASNAETARNAFLIHPKWILLSPNNVMAPLNLFL   46 (48)
Q Consensus        14 asnaetarnaflihpkwillspnnvmaplnlfl   46 (48)
                      +|.-+-..+..+|+--||    ..-|.||||||
T Consensus       398 ~~~v~~~~d~~ii~hly~----ERrm~PLnlyl  426 (578)
T 3eps_A          398 AEKITDLGEQIVIRHLYI----ERRMVPLNIWL  426 (578)
T ss_dssp             GGGEEEETTEEEEEEEEE----EECCEEHHHHH
T ss_pred             CHHEEECCCEEEEEEEEE----EEEECCHHHHH
T ss_conf             411798586799887777----63100366788


No 6  
>2l14_B Cellular tumor antigen P53; CBP, TAD, protein binding; NMR {Homo sapiens}
Probab=4.52  E-value=55  Score=15.05  Aligned_cols=14  Identities=57%  Similarity=1.056  Sum_probs=9.1

Q ss_pred             EEEEECCCCCEEEE
Q ss_conf             38998675511003
Q 537021.9.peg.1   29 KWILLSPNNVMAPL   42 (48)
Q Consensus        29 kwillspnnvmapl   42 (48)
                      -|-||.+|||..++
T Consensus        10 LWkLLPenNvLS~~   23 (49)
T 2l14_B           10 LWKLLPENNVLSPL   23 (49)
T ss_dssp             HHHHSSTTCCCSSS
T ss_pred             HHHHCCCCCCCCCC
T ss_conf             99867854445555


No 7  
>2g7j_A Putative cytoplasmic protein; STR72, structure, autostructure, structural genomics, PSI, protein structure initiative; NMR {Salmonella typhimurium LT2} SCOP: d.198.5.1
Probab=3.80  E-value=2.3e+02  Score=12.11  Aligned_cols=15  Identities=40%  Similarity=0.791  Sum_probs=11.3

Q ss_pred             CCCCCCCEEEECCEE
Q ss_conf             531002156653238
Q 537021.9.peg.1   16 NAETARNAFLIHPKW   30 (48)
Q Consensus        16 naetarnaflihpkw   30 (48)
                      .|.-.|.|.+|||..
T Consensus        41 EaRmGRTALvIHP~l   55 (124)
T 2g7j_A           41 EARMGRTALIIHPRL   55 (124)
T ss_dssp             TCSSTTSCEECCSSC
T ss_pred             HHHCCCEEEEECHHH
T ss_conf             561584368865147


No 8  
>3bbo_1 Ribosomal protein L31; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}
Probab=3.53  E-value=1.6e+02  Score=12.86  Aligned_cols=22  Identities=14%  Similarity=0.333  Sum_probs=0.0

Q ss_pred             CCCEEECCCCCCCCEEE-----------ECCEE
Q ss_conf             53023135310021566-----------53238
Q 537021.9.peg.1    9 PNRVMASNAETARNAFL-----------IHPKW   30 (48)
Q Consensus         9 pnrvmasnaetarnafl-----------ihpkw   30 (48)
                      +++++..--...|+...           |||+|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~KKdIHP~y   57 (144)
T 3bbo_1           25 VMAAVKGGKQSVRRSSNTVVQITCRKKELHPEF   57 (144)
T ss_dssp             -------------------------CTTTCCCC
T ss_pred             CCHHHHHCCHHHHHCCCCCCEEECCCCCCCCCC
T ss_conf             111344400334320121001101358889898


No 9  
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase; beta barrel, cupin; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=3.37  E-value=79  Score=14.31  Aligned_cols=26  Identities=23%  Similarity=0.468  Sum_probs=0.0

Q ss_pred             CCEEEEECCCCEEECCCCCCCCEEEE
Q ss_conf             96068873530231353100215665
Q 537021.9.peg.1    1 MKTKVMVHPNRVMASNAETARNAFLI   26 (48)
Q Consensus         1 mktkvmvhpnrvmasnaetarnafli   26 (48)
                      |.+.--+||..+..-+.+.-|..|||
T Consensus         4 m~~r~a~~p~~~~~~~t~~lr~~fli   29 (282)
T 1xru_A            4 MDVRQSIHSAHAKTLDTQGLRNEFLV   29 (282)
T ss_dssp             CEEECCCCHHHHTTCCHHHHHHHHEE
T ss_pred             CEEECCCCHHHHHHCCHHHHHHHHCH
T ss_conf             24661699799712899999975046


No 10 
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=3.32  E-value=2.5e+02  Score=11.93  Aligned_cols=6  Identities=67%  Similarity=1.592  Sum_probs=0.0

Q ss_pred             EEEEEC
Q ss_conf             389986
Q 537021.9.peg.1   29 KWILLS   34 (48)
Q Consensus        29 kwills   34 (48)
                      .|+|||
T Consensus        19 ewvlls   24 (27)
T 2ww6_A           19 EWVLLS   24 (27)
T ss_dssp             EEEEGG
T ss_pred             CEEEEE
T ss_conf             289986


Done!