Query 537021.9.peg.1087_1 Match_columns 48 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 08:27:38 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1087.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1p3ca_ b.47.1.1 (A:) Glutamyl 4.6 1.3E+02 0.0093 12.2 2.0 23 15-37 26-48 (215) 2 d2g7ja1 d.198.5.1 (A:1-112) Pu 4.2 1.2E+02 0.0084 12.4 0.6 15 16-30 41-55 (112) 3 d1ofda3 d.153.1.1 (A:1-430) Al 2.3 2.2E+02 0.016 11.1 0.4 13 7-19 218-230 (430) 4 d3be7a1 b.92.1.9 (A:3-56,A:360 2.2 2.4E+02 0.017 10.9 1.5 10 23-32 3-12 (95) 5 d1ea0a3 d.153.1.1 (A:1-422) Al 1.8 2.7E+02 0.02 10.6 0.4 13 7-19 222-234 (422) 6 d1ywka1 b.82.1.13 (A:1001-1260 1.8 78 0.0057 13.2 -2.6 19 8-26 8-26 (260) 7 d3rp2a_ b.47.1.2 (A:) Chymase 1.8 2.8E+02 0.02 10.6 2.4 22 21-42 30-51 (224) 8 d1gdna_ b.47.1.2 (A:) Trypsin( 1.7 2.9E+02 0.021 10.5 1.7 13 22-34 27-39 (224) 9 d2j9ga2 c.30.1.1 (A:1-114) Bio 1.6 1.3E+02 0.0098 12.1 -1.6 11 26-36 78-88 (114) 10 d1xrua1 b.82.1.13 (A:1-277) 5- 1.5 1.2E+02 0.0084 12.4 -2.1 26 1-26 1-26 (277) No 1 >d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]} Probab=4.61 E-value=1.3e+02 Score=12.19 Aligned_cols=23 Identities=22% Similarity=0.216 Sum_probs=14.8 Q ss_pred CCCCCCCCEEEECCEEEEECCCC Q ss_conf 35310021566532389986755 Q 537021.9.peg.1 15 SNAETARNAFLIHPKWILLSPNN 37 (48) Q Consensus 15 snaetarnaflihpkwillspnn 37 (48) ++....-.++||+|.|||-.-.. T Consensus 26 ~~~~~~CsG~LI~~~~VLTaaHC 48 (215) T d1p3ca_ 26 TFGGSSCTGTLIAPNKILTNGHC 48 (215) T ss_dssp ECSSCEEEEEEEETTEEEECHHH T ss_pred ECCCEEEEEEEEECCEEEECCCE T ss_conf 84990799999939989987225 No 2 >d2g7ja1 d.198.5.1 (A:1-112) Putative cytoplasmic protein YgaC {Salmonella typhimurium [TaxId: 90371]} Probab=4.23 E-value=1.2e+02 Score=12.39 Aligned_cols=15 Identities=40% Similarity=0.791 Sum_probs=11.3 Q ss_pred CCCCCCCEEEECCEE Q ss_conf 531002156653238 Q 537021.9.peg.1 16 NAETARNAFLIHPKW 30 (48) Q Consensus 16 naetarnaflihpkw 30 (48) .|.-.|.|.+|||.. T Consensus 41 EarmGRTALvIHP~l 55 (112) T d2g7ja1 41 EARMGRTALIIHPRL 55 (112) T ss_dssp TCSSTTSCEECCSSC T ss_pred HHHCCCEEEEECHHH T ss_conf 562574368864667 No 3 >d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Probab=2.30 E-value=2.2e+02 Score=11.07 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=8.1 Q ss_pred ECCCCEEECCCCC Q ss_conf 7353023135310 Q 537021.9.peg.1 7 VHPNRVMASNAET 19 (48) Q Consensus 7 vhpnrvmasnaet 19 (48) .||.|.++.|.|- T Consensus 218 AQPfR~laHNGEI 230 (430) T d1ofda3 218 AQPMRLLGHNGEI 230 (430) T ss_dssp SSCCSSEEEEECC T ss_pred CCCCCCCCCCCCC T ss_conf 1851001477640 No 4 >d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} Probab=2.18 E-value=2.4e+02 Score=10.90 Aligned_cols=10 Identities=50% Similarity=0.607 Sum_probs=5.1 Q ss_pred EEEECCEEEE Q ss_conf 5665323899 Q 537021.9.peg.1 23 AFLIHPKWIL 32 (48) Q Consensus 23 aflihpkwil 32 (48) .|+++||-+| T Consensus 3 d~~~~pk~yL 12 (95) T d3be7a1 3 DFLIKSKGYL 12 (95) T ss_dssp CEEEEEEEEE T ss_pred CEEECCCCEE T ss_conf 5574573130 No 5 >d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Probab=1.83 E-value=2.7e+02 Score=10.61 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=7.5 Q ss_pred ECCCCEEECCCCC Q ss_conf 7353023135310 Q 537021.9.peg.1 7 VHPNRVMASNAET 19 (48) Q Consensus 7 vhpnrvmasnaet 19 (48) .||.|.++.|.|- T Consensus 222 AQPFR~laHNGEI 234 (422) T d1ea0a3 222 AQPFRMLAHNGEI 234 (422) T ss_dssp SSCCSSEEEEECC T ss_pred CCCEEEECCCCCH T ss_conf 3842322478746 No 6 >d1ywka1 b.82.1.13 (A:1001-1260) 5-keto-4-deoxyuronate isomerase KduI {Enterococcus faecalis [TaxId: 1351]} Probab=1.77 E-value=78 Score=13.19 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=6.1 Q ss_pred CCCCEEECCCCCCCCEEEE Q ss_conf 3530231353100215665 Q 537021.9.peg.1 8 HPNRVMASNAETARNAFLI 26 (48) Q Consensus 8 hpnrvmasnaetarnafli 26 (48) ||..+-.-+.+.-|..||| T Consensus 8 ~p~~~k~~~t~~lr~~fli 26 (260) T d1ywka1 8 SPADIRHYSTEQLRDEFLV 26 (260) T ss_dssp CHHHHTTCCHHHHHHHHEE T ss_pred CHHHHCCCCHHHHHHHHCH T ss_conf 9799601799999975156 No 7 >d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]} Probab=1.77 E-value=2.8e+02 Score=10.55 Aligned_cols=22 Identities=18% Similarity=0.317 Sum_probs=14.1 Q ss_pred CCEEEECCEEEEECCCCCEEEE Q ss_conf 2156653238998675511003 Q 537021.9.peg.1 21 RNAFLIHPKWILLSPNNVMAPL 42 (48) Q Consensus 21 rnaflihpkwillspnnvmapl 42 (48) -..-||++.|+|-+-.-+...+ T Consensus 30 C~GtLIs~~~VLTaA~C~~~~~ 51 (224) T d3rp2a_ 30 CGGFLISRQFVLTAAHCKGREI 51 (224) T ss_dssp EEEEESSSSEEEECGGGCCSEE T ss_pred EEEEEECCCEEEECCCCCCCCC T ss_conf 9889983981696543466454 No 8 >d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]} Probab=1.69 E-value=2.9e+02 Score=10.48 Aligned_cols=13 Identities=15% Similarity=0.274 Sum_probs=0.0 Q ss_pred CEEEECCEEEEEC Q ss_conf 1566532389986 Q 537021.9.peg.1 22 NAFLIHPKWILLS 34 (48) Q Consensus 22 naflihpkwills 34 (48) .+-||+|.|||-+ T Consensus 27 ~GtLIs~~~VLTa 39 (224) T d1gdna_ 27 GGSLLNANTVLTA 39 (224) T ss_dssp EEEEEETTEEEEC T ss_pred EEEEEECCEEEEC T ss_conf 9999849999998 No 9 >d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]} Probab=1.60 E-value=1.3e+02 Score=12.08 Aligned_cols=11 Identities=55% Similarity=0.836 Sum_probs=0.0 Q ss_pred ECCEEEEECCC Q ss_conf 53238998675 Q 537021.9.peg.1 26 IHPKWILLSPN 36 (48) Q Consensus 26 ihpkwillspn 36 (48) |||-|=.||-| T Consensus 78 iHPGyGFLSEn 88 (114) T d2j9ga2 78 IHPGYGFLSEN 88 (114) T ss_dssp EECCSSTTTTC T ss_pred EECCHHHHHHH T ss_conf 64243665522 No 10 >d1xrua1 b.82.1.13 (A:1-277) 5-keto-4-deoxyuronate isomerase KduI {Escherichia coli [TaxId: 562]} Probab=1.54 E-value=1.2e+02 Score=12.38 Aligned_cols=26 Identities=23% Similarity=0.468 Sum_probs=0.0 Q ss_pred CCEEEEECCCCEEECCCCCCCCEEEE Q ss_conf 96068873530231353100215665 Q 537021.9.peg.1 1 MKTKVMVHPNRVMASNAETARNAFLI 26 (48) Q Consensus 1 mktkvmvhpnrvmasnaetarnafli 26 (48) |.++--+||..+-.-+.+.-|..||| T Consensus 1 m~~r~~~~p~~~~~~~t~~lr~~fli 26 (277) T d1xrua1 1 MDVRQSIHSAHAKTLDTQGLRNEFLV 26 (277) T ss_dssp CEEECCCCHHHHTTCCHHHHHHHHEE T ss_pred CCCCCCCCHHHHCCCCHHHHHHHHCH T ss_conf 96213689789620798999975146 Done!