RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.1090_1
         (38 letters)



>d1nvmb2 d.81.1.1 (B:132-286) Acetaldehyde dehydrogenase (acylating)
           {Pseudomonas sp. [TaxId: 306]}
          Length = 155

 Score = 24.8 bits (54), Expect = 2.2
 Identities = 5/30 (16%), Positives = 14/30 (46%)

Query: 3   FAMCDPLFCLILYFLLLKICENVRKIVKSM 32
             M D ++ L        +  +V ++V+++
Sbjct: 74  LIMRDTVYVLSAAADQAAVAASVAEMVQAV 103


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.347    0.157    0.494 

Gapped
Lambda     K      H
   0.267   0.0547    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 128,470
Number of extensions: 2665
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 2
Length of query: 38
Length of database: 2,407,596
Length adjustment: 11
Effective length of query: 27
Effective length of database: 2,256,566
Effective search space: 60927282
Effective search space used: 60927282
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 47 (22.3 bits)