Query 537021.9.peg.1123_1
Match_columns 48
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 07:21:25 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_1123.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s0ua2 b.44.1.1 (A:348-437) I 6.1 8.2 0.0006 17.9 -4.2 20 20-39 65-84 (90)
2 d1u6za2 c.55.1.8 (A:12-135) Ex 5.7 1.1E+02 0.0078 12.7 1.5 20 19-38 82-101 (124)
3 d1kk1a2 b.44.1.1 (A:322-410) I 5.6 15 0.0011 16.7 -3.1 20 20-39 64-83 (89)
4 d1t6ca1 c.55.1.8 (A:7-132) Exo 5.5 1.1E+02 0.0081 12.6 1.8 20 19-38 85-104 (126)
5 d2qn6a2 b.44.1.1 (A:321-415) I 5.4 9.9 0.00072 17.5 -4.1 17 23-39 73-89 (95)
6 d1tska_ g.3.7.2 (A:) Toxin ts 2.6 97 0.0071 12.9 -1.1 12 25-36 15-26 (35)
7 d1te7a_ b.122.1.7 (A:) Hypothe 2.3 2.3E+02 0.017 11.1 1.4 14 35-48 89-102 (103)
8 d3cipg1 d.109.1.1 (G:2-125) Ge 2.0 2.6E+02 0.019 10.9 0.9 5 40-44 41-45 (124)
9 d2eyqa1 b.34.18.1 (A:466-545) 1.9 2.7E+02 0.02 10.7 1.8 12 36-47 38-49 (80)
10 d1b8pa2 d.162.1.1 (A:159-329) 1.8 2.8E+02 0.021 10.7 2.0 22 22-43 7-28 (171)
No 1
>d1s0ua2 b.44.1.1 (A:348-437) Initiation factor eIF2 gamma subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=6.09 E-value=8.2 Score=17.92 Aligned_cols=20 Identities=50% Similarity=0.665 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHCCEE
Q ss_conf 12216899987544306202
Q 537021.9.peg.1 20 EKRNRSAISRRIGQRTGIIH 39 (48)
Q Consensus 20 ekrnrsaisrrigqrtgiih 39 (48)
++-.|-||||||+.|--+|.
T Consensus 65 ~~g~rVaiSRri~~rWRLIG 84 (90)
T d1s0ua2 65 EIGDRVAISRRVGSRWRLIG 84 (90)
T ss_dssp CTTCEEEEEEECSSSEEEEE
T ss_pred CCCCEEEEEEEECCEEEEEE
T ss_conf 88999999978688799997
No 2
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=5.73 E-value=1.1e+02 Score=12.66 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHCCE
Q ss_conf 01221689998754430620
Q 537021.9.peg.1 19 REKRNRSAISRRIGQRTGII 38 (48)
Q Consensus 19 rekrnrsaisrrigqrtgii 38 (48)
|+-.|+..+-.+|-++||+-
T Consensus 82 R~A~N~~~~~~~i~~~~gi~ 101 (124)
T d1u6za2 82 RQALNATDFLKRAEKVIPYP 101 (124)
T ss_dssp HHCTTHHHHHHHHTTTCSSC
T ss_pred HCCCCHHHHHHHHHHHHCCC
T ss_conf 80866889999999986999
No 3
>d1kk1a2 b.44.1.1 (A:322-410) Initiation factor eIF2 gamma subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=5.61 E-value=15 Score=16.66 Aligned_cols=20 Identities=50% Similarity=0.652 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHCCEE
Q ss_conf 12216899987544306202
Q 537021.9.peg.1 20 EKRNRSAISRRIGQRTGIIH 39 (48)
Q Consensus 20 ekrnrsaisrrigqrtgiih 39 (48)
++-.|-||||||+.|--+|.
T Consensus 64 ~~g~rVaiSRri~~rWRLIG 83 (89)
T d1kk1a2 64 EPGDRVAISRQIGSRWRLIG 83 (89)
T ss_dssp CTTCEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEEEECCEEEEEE
T ss_conf 88999999978687799984
No 4
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=5.47 E-value=1.1e+02 Score=12.58 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHCCE
Q ss_conf 01221689998754430620
Q 537021.9.peg.1 19 REKRNRSAISRRIGQRTGII 38 (48)
Q Consensus 19 rekrnrsaisrrigqrtgii 38 (48)
|+-.|+..+-.+|-++||+-
T Consensus 85 R~A~N~~~~~~~i~~~tgi~ 104 (126)
T d1t6ca1 85 RRAKNAEEFLERVKREVGLV 104 (126)
T ss_dssp HTSTTHHHHHHHHHHHTCCC
T ss_pred HHCCCHHHHHHHHHHHHCCC
T ss_conf 80859999999999987999
No 5
>d2qn6a2 b.44.1.1 (A:321-415) Initiation factor eIF2 gamma subunit {Sulfolobus solfataricus [TaxId: 2287]}
Probab=5.40 E-value=9.9 Score=17.54 Aligned_cols=17 Identities=41% Similarity=0.485 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHCCEE
Q ss_conf 16899987544306202
Q 537021.9.peg.1 23 NRSAISRRIGQRTGIIH 39 (48)
Q Consensus 23 nrsaisrrigqrtgiih 39 (48)
.|-||||||+.|--+|.
T Consensus 73 ~rVaiSRri~~rWRLIG 89 (95)
T d2qn6a2 73 IRTVISRQIAGRWRMIG 89 (95)
T ss_dssp EEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEECCEEEEEE
T ss_conf 28999988588799984
No 6
>d1tska_ g.3.7.2 (A:) Toxin ts kappa {Scorpion (Tityus serrulatus) [TaxId: 6887]}
Probab=2.58 E-value=97 Score=12.86 Aligned_cols=12 Identities=42% Similarity=0.661 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHC
Q ss_conf 899987544306
Q 537021.9.peg.1 25 SAISRRIGQRTG 36 (48)
Q Consensus 25 saisrrigqrtg 36 (48)
||-..-+|..||
T Consensus 15 sackklvgkatg 26 (35)
T d1tska_ 15 SACKKLVGKATG 26 (35)
T ss_dssp HHHHHHTSSSCC
T ss_pred HHHHHHHHHCCC
T ss_conf 999998613037
No 7
>d1te7a_ b.122.1.7 (A:) Hypothetical protein YqfB {Escherichia coli [TaxId: 562]}
Probab=2.30 E-value=2.3e+02 Score=11.08 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=9.6
Q ss_pred HCCEEEEEEEEECC
Q ss_conf 06202247887409
Q 537021.9.peg.1 35 TGIIHDCYVIEFDL 48 (48)
Q Consensus 35 tgiihdcyviefdl 48 (48)
-.-+..-|||+|.|
T Consensus 89 YP~~~~lyvI~f~l 102 (103)
T d1te7a_ 89 YPGQTQFYVIEFKC 102 (103)
T ss_dssp CSCCSCEEEEEEEC
T ss_pred CCCCCEEEEEEEEE
T ss_conf 89986589999996
No 8
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.01 E-value=2.6e+02 Score=10.85 Aligned_cols=5 Identities=80% Similarity=1.358 Sum_probs=0.0
Q ss_pred EEEEE
Q ss_conf 24788
Q 537021.9.peg.1 40 DCYVI 44 (48)
Q Consensus 40 dcyvi 44 (48)
|||+|
T Consensus 41 d~YIi 45 (124)
T d3cipg1 41 DAYVI 45 (124)
T ss_dssp CEEEE
T ss_pred CEEEE
T ss_conf 87999
No 9
>d2eyqa1 b.34.18.1 (A:466-545) Transcription-repair coupling factor, RRCF, middle domain {Escherichia coli [TaxId: 562]}
Probab=1.87 E-value=2.7e+02 Score=10.74 Aligned_cols=12 Identities=17% Similarity=0.553 Sum_probs=0.0
Q ss_pred CCEEEEEEEEEC
Q ss_conf 620224788740
Q 537021.9.peg.1 36 GIIHDCYVIEFD 47 (48)
Q Consensus 36 giihdcyviefd 47 (48)
|..+||.+|||.
T Consensus 38 g~~~e~l~leY~ 49 (80)
T d2eyqa1 38 GITGEYLMLTYA 49 (80)
T ss_dssp SCEEEEEEEECG
T ss_pred CCCCCEEEEEEC
T ss_conf 877855999986
No 10
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}
Probab=1.78 E-value=2.8e+02 Score=10.66 Aligned_cols=22 Identities=27% Similarity=0.433 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHCCEEEEEE
Q ss_conf 2168999875443062022478
Q 537021.9.peg.1 22 RNRSAISRRIGQRTGIIHDCYV 43 (48)
Q Consensus 22 rnrsaisrrigqrtgiihdcyv 43 (48)
|-|+.++.+.|-.+.-+|+.+|
T Consensus 7 R~r~~lA~kl~v~~~~V~~~iI 28 (171)
T d1b8pa2 7 RALSQIAAKTGKPVSSIEKLFV 28 (171)
T ss_dssp HHHHHHHHHHTCCGGGEESCEE
T ss_pred HHHHHHHHHHCCCHHHEEEEEE
T ss_conf 9999999997949899179999
Done!