RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= 537021.9.peg.1140_1 (90 letters) >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Score = 23.9 bits (51), Expect = 3.9 Identities = 9/32 (28%), Positives = 14/32 (43%) Query: 7 DHYITREEFIEFCTNSNSKQDCLISQFKLFEK 38 +H IT EE +E ++ L +L E Sbjct: 12 EHVITMEETLELARRRHTDHPQLPLALRLIEN 43 >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 Score = 23.6 bits (50), Expect = 4.3 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 4/32 (12%) Query: 7 DHYITREEFIEFCTNSNSKQDCLISQFKLFEK 38 D YIT +EF E +I L++ Sbjct: 161 DGYITLDEFREGS----KVDPSIIGALNLYDG 188 >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 Score = 23.2 bits (49), Expect = 5.8 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 4/31 (12%) Query: 7 DHYITREEFIEFCTNSNSKQDCLISQFKLFE 37 D +T +EF+E C + D ++ +LF+ Sbjct: 149 DGIVTLDEFLESC----QEDDNIMRSLQLFQ 175 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.323 0.136 0.400 Gapped Lambda K H 0.267 0.0584 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 325,339 Number of extensions: 12208 Number of successful extensions: 40 Number of sequences better than 10.0: 1 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 18 Length of query: 90 Length of database: 2,407,596 Length adjustment: 54 Effective length of query: 36 Effective length of database: 1,666,176 Effective search space: 59982336 Effective search space used: 59982336 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 47 (22.2 bits)