Query 537021.9.peg.116_1 Match_columns 39 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Mon May 23 22:41:20 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_116.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2ca5a1 a.2.20.1 (A:20-78) Mxi 14.1 17 0.0013 16.8 -0.1 17 22-38 36-52 (59) 2 d2gbsa1 b.122.1.8 (A:2-137) Hy 6.7 28 0.0021 15.8 -1.2 26 5-32 32-57 (136) 3 d1mx3a2 c.23.12.1 (A:27-125,A: 3.0 1.1E+02 0.008 13.1 -0.4 10 22-31 123-132 (133) 4 d1hy9a_ g.3.17.1 (A:) Satiety 2.6 1.1E+02 0.0077 13.1 -0.9 16 12-27 18-36 (41) 5 d1llaa1 a.85.1.1 (A:2-109) Hem 2.5 1E+02 0.0073 13.2 -1.1 16 10-25 31-46 (108) 6 d2lisa_ a.19.1.1 (A:) Lysin {R 2.5 2.2E+02 0.016 11.6 0.6 19 12-30 67-85 (131) 7 d3lyna_ a.19.1.1 (A:) Lysin {G 2.4 2.3E+02 0.017 11.6 0.6 19 12-30 60-78 (122) 8 d1d0da_ g.8.1.2 (A:) Anticoagu 2.1 2.1E+02 0.015 11.8 0.1 12 22-33 47-58 (60) 9 d2ar1a1 b.122.1.8 (A:7-163) Hy 2.1 1.1E+02 0.0078 13.1 -1.4 23 5-27 35-57 (157) 10 d1e0na_ b.72.1.1 (A:) Hypothet 2.1 1.4E+02 0.011 12.5 -0.8 12 18-29 9-20 (27) No 1 >d2ca5a1 a.2.20.1 (A:20-78) MxiH needle protein {Shigella flexneri [TaxId: 623]} Probab=14.07 E-value=17 Score=16.79 Aligned_cols=17 Identities=41% Similarity=0.561 Sum_probs=14.1 Q ss_pred HHHHHHHHHHHHHHEEC Q ss_conf 53212332121210102 Q 537021.9.peg.1 22 MFYNSYRNCIINTINVF 38 (39) Q Consensus 22 mfynsyrnciintinvf 38 (39) --||-|||.--++|.+| T Consensus 36 sEYnlyRNAQSstVK~~ 52 (59) T d2ca5a1 36 SEYTLYRNAQSNTVKVI 52 (59) T ss_dssp HHHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHH T ss_conf 99999987215588999 No 2 >d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253 {Rhodopseudomonas palustris [TaxId: 1076]} Probab=6.70 E-value=28 Score=15.78 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=18.7 Q ss_pred EEECCCHHHHHHHCCHHHHHHHHHHHHH Q ss_conf 5200137778520324453212332121 Q 537021.9.peg.1 5 TYEAYNYKKRIGKLPRTMFYNSYRNCII 32 (39) Q Consensus 5 tyeaynykkrigklprtmfynsyrncii 32 (39) .|+|-|+-+...+--+..||.| ||-. T Consensus 32 NyqArn~mr~M~~GD~~~fYHS--~~~~ 57 (136) T d2gbsa1 32 NHSAKLHMVAMRRGDRAFYYHS--NEGK 57 (136) T ss_dssp CHHHHHHHHHCCTTCEEEEEET--TTTC T ss_pred CHHHHHHHHHHCCCCEEEEEEC--CCCC T ss_conf 4999999997515778999853--8888 No 3 >d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Probab=3.03 E-value=1.1e+02 Score=13.07 Aligned_cols=10 Identities=30% Similarity=0.723 Sum_probs=6.6 Q ss_pred HHHHHHHHHH Q ss_conf 5321233212 Q 537021.9.peg.1 22 MFYNSYRNCI 31 (39) Q Consensus 22 mfynsyrnci 31 (39) -+.+++|||. T Consensus 123 ~~~~~~~n~~ 132 (133) T d1mx3a2 123 RIPDSLKNCV 132 (133) T ss_dssp CTTTTCSSBC T ss_pred CCCCHHHCCC T ss_conf 5231010345 No 4 >d1hy9a_ g.3.17.1 (A:) Satiety factor CART (cocaine and amphetamine regulated transcript) {Human (Homo sapiens) [TaxId: 9606]} Probab=2.62 E-value=1.1e+02 Score=13.13 Aligned_cols=16 Identities=56% Similarity=0.821 Sum_probs=9.9 Q ss_pred HHHHHHC---CHHHHHHHH Q ss_conf 7785203---244532123 Q 537021.9.peg.1 12 KKRIGKL---PRTMFYNSY 27 (39) Q Consensus 12 kkrigkl---prtmfynsy 27 (39) -.||||| ||.-+-|.| T Consensus 18 G~RIgklC~Cprgt~CN~f 36 (41) T d1hy9a_ 18 GARIGKLCDCPRGTSCNSF 36 (41) T ss_dssp SSSEEECCBCCTTCCBCTT T ss_pred CCCCCCCCCCCCCCCCEEE T ss_conf 6620100369887731056 No 5 >d1llaa1 a.85.1.1 (A:2-109) Hemocyanin, N-terminal domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]} Probab=2.50 E-value=1e+02 Score=13.24 Aligned_cols=16 Identities=25% Similarity=0.476 Sum_probs=9.5 Q ss_pred CHHHHHHHCCHHHHHH Q ss_conf 3777852032445321 Q 537021.9.peg.1 10 NYKKRIGKLPRTMFYN 25 (39) Q Consensus 10 nykkrigklprtmfyn 25 (39) +--+++|.|||-..+. T Consensus 31 ~~l~~~g~Lpr~~~FS 46 (108) T d1llaa1 31 DRLKNVGKLQPGAIFS 46 (108) T ss_dssp SGGGGCCCSCTTSCCC T ss_pred HHHHHCCCCCCCCCCC T ss_conf 9886178579998510 No 6 >d2lisa_ a.19.1.1 (A:) Lysin {Red abalone (Haliotis rufescens) [TaxId: 6454]} Probab=2.45 E-value=2.2e+02 Score=11.62 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=13.1 Q ss_pred HHHHHHCCHHHHHHHHHHH Q ss_conf 7785203244532123321 Q 537021.9.peg.1 12 KKRIGKLPRTMFYNSYRNC 30 (39) Q Consensus 12 kkrigklprtmfynsyrnc 30 (39) .|+|.||-|+---+.|+++ T Consensus 67 ~k~i~kLGR~P~~~DY~~l 85 (131) T d2lisa_ 67 NKKIDALGRTPVVGDYTRL 85 (131) T ss_dssp HHHHHTSSSCCCHHHHHHH T ss_pred HHHHHHHCCCCCHHHHHHH T ss_conf 9999994899865579999 No 7 >d3lyna_ a.19.1.1 (A:) Lysin {Green abalone (Haliotis fulgens) [TaxId: 6456]} Probab=2.39 E-value=2.3e+02 Score=11.57 Aligned_cols=19 Identities=26% Similarity=0.378 Sum_probs=13.0 Q ss_pred HHHHHHCCHHHHHHHHHHH Q ss_conf 7785203244532123321 Q 537021.9.peg.1 12 KKRIGKLPRTMFYNSYRNC 30 (39) Q Consensus 12 kkrigklprtmfynsyrnc 30 (39) .|+|.||-|+---+.|+++ T Consensus 60 ~k~i~kLgR~P~~~DY~~l 78 (122) T d3lyna_ 60 KRKIKALGRPAAVGDYTRL 78 (122) T ss_dssp HHHHHTTSSCCCHHHHHHH T ss_pred HHHHHHHCCCCCHHHHHHH T ss_conf 9999994899865579999 No 8 >d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]} Probab=2.14 E-value=2.1e+02 Score=11.77 Aligned_cols=12 Identities=42% Similarity=1.029 Sum_probs=8.4 Q ss_pred HHHHHHHHHHHH Q ss_conf 532123321212 Q 537021.9.peg.1 22 MFYNSYRNCIIN 33 (39) Q Consensus 22 mfynsyrnciin 33 (39) -+|.|||.|.-. T Consensus 47 dyyss~~dc~~a 58 (60) T d1d0da_ 47 DYYSSYRDCFNA 58 (60) T ss_dssp CCCCSHHHHHHH T ss_pred CCHHHHHHHHHH T ss_conf 201208888872 No 9 >d2ar1a1 b.122.1.8 (A:7-163) Hypothetical protein LmjF36.6870 {Leishmania major [TaxId: 5664]} Probab=2.11 E-value=1.1e+02 Score=13.11 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=18.0 Q ss_pred EEECCCHHHHHHHCCHHHHHHHH Q ss_conf 52001377785203244532123 Q 537021.9.peg.1 5 TYEAYNYKKRIGKLPRTMFYNSY 27 (39) Q Consensus 5 tyeaynykkrigklprtmfynsy 27 (39) .|.|-|+.+.+.+=-+..||.|- T Consensus 35 N~qArn~lr~Mk~GD~~~fYHS~ 57 (157) T d2ar1a1 35 NYAARNNMRAMSVGDKVLFYHSN 57 (157) T ss_dssp CHHHHHHHHHCCTTCEEEEEECS T ss_pred HHHHHHHHHHCCCCCEEEEEECC T ss_conf 19999999867578889999748 No 10 >d1e0na_ b.72.1.1 (A:) Hypothetical protein Yjq8 (Set2p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=2.07 E-value=1.4e+02 Score=12.51 Aligned_cols=12 Identities=25% Similarity=0.567 Sum_probs=7.7 Q ss_pred CCHHHHHHHHHH Q ss_conf 324453212332 Q 537021.9.peg.1 18 LPRTMFYNSYRN 29 (39) Q Consensus 18 lprtmfynsyrn 29 (39) --|.|+||.-+. T Consensus 9 ngrpmyynaq~q 20 (27) T d1e0na_ 9 NGRPLYYNAEQK 20 (27) T ss_dssp SSSEEEEETTTT T ss_pred CCCEEEEEHHHH T ss_conf 893626616554 Done!