Query 537021.9.peg.15_1
Match_columns 47
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Sun May 22 06:51:18 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_15.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ijdb_ f.3.1.1 (B:) Light-har 6.3 83 0.006 12.0 2.6 19 15-33 12-30 (40)
2 d1nkzb_ f.3.1.1 (B:) Light-har 5.8 89 0.0065 11.9 2.6 19 15-33 11-29 (41)
3 d2axtl1 f.23.31.1 (L:1-37) Pho 5.2 98 0.0071 11.7 1.0 11 31-41 26-36 (37)
4 d2es9a1 a.247.1.1 (A:11-107) H 5.0 77 0.0056 12.2 0.2 12 14-25 84-95 (97)
5 d2ogqa1 d.223.1.2 (A:371-494) 2.9 1.6E+02 0.011 10.6 2.6 15 8-22 105-119 (124)
6 d1j5ua_ d.208.1.1 (A:) Hypothe 2.0 2.1E+02 0.015 10.0 0.9 15 29-43 64-78 (127)
7 d1jb0f_ f.23.16.1 (F:) Subunit 2.0 2.1E+02 0.016 9.9 3.0 19 9-27 67-85 (141)
8 d1p2za2 b.121.2.2 (A:651-962) 2.0 1.9E+02 0.014 10.2 -0.3 6 36-41 240-245 (312)
9 d2hkua2 a.121.1.1 (A:88-208) P 1.9 2.3E+02 0.017 9.8 2.0 12 19-30 72-83 (121)
10 d2je8a2 b.1.4.1 (A:784-864) Be 1.9 1.9E+02 0.014 10.2 -0.5 6 36-41 41-46 (81)
No 1
>d1ijdb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=6.30 E-value=83 Score=12.04 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999988778999999999
Q 537021.9.peg.1 15 FAKYLRESTRAFFSLATLL 33 (47)
Q Consensus 15 fakylrestraffslatll 33 (47)
.-||+-..||.|+..|-+-
T Consensus 12 lHk~vIdGtRvF~~iA~~A 30 (40)
T d1ijdb_ 12 LHKHVIDGTRVFLVIAAIA 30 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHH
T ss_conf 9987516336899999999
No 2
>d1nkzb_ f.3.1.1 (B:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=5.77 E-value=89 Score=11.87 Aligned_cols=19 Identities=37% Similarity=0.651 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999988778999999999
Q 537021.9.peg.1 15 FAKYLRESTRAFFSLATLL 33 (47)
Q Consensus 15 fakylrestraffslatll 33 (47)
.-||+-..||.|+..|-+-
T Consensus 11 lHk~vIdGtRvF~~iA~~A 29 (41)
T d1nkzb_ 11 LHKYVIDGTRVFLGLALVA 29 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHH
T ss_conf 9987516337899999999
No 3
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.18 E-value=98 Score=11.66 Aligned_cols=11 Identities=64% Similarity=0.932 Sum_probs=7.1
Q ss_pred HHHHHHHCCHH
Q ss_conf 99999824612
Q 537021.9.peg.1 31 TLLYLFSSNFF 41 (47)
Q Consensus 31 tllylfssnff 41 (47)
.+--||||-||
T Consensus 26 vl~vLFssYfF 36 (37)
T d2axtl1 26 VLALLFSSYFF 36 (37)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHC
T ss_conf 99999998704
No 4
>d2es9a1 a.247.1.1 (A:11-107) Hypothetical protein YoaC {Salmonella typhimurium [TaxId: 90371]}
Probab=5.04 E-value=77 Score=12.19 Aligned_cols=12 Identities=33% Similarity=0.924 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999887789
Q 537021.9.peg.1 14 YFAKYLRESTRA 25 (47)
Q Consensus 14 yfakylrestra 25 (47)
||..|.+|.-||
T Consensus 84 yFstYM~eeLka 95 (97)
T d2es9a1 84 YFSTYMQEQLKE 95 (97)
T ss_dssp GSCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999986
No 5
>d2ogqa1 d.223.1.2 (A:371-494) Serine/threonine-protein kinase plk C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.93 E-value=1.6e+02 Score=10.63 Aligned_cols=15 Identities=27% Similarity=0.704 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999887
Q 537021.9.peg.1 8 DFLIFLYFAKYLRES 22 (47)
Q Consensus 8 dfliflyfakylres 22 (47)
...+.-||++|+.+.
T Consensus 105 Kv~ll~~F~~Ym~~~ 119 (124)
T d2ogqa1 105 KITLLKYFRNYMSEH 119 (124)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 769999999999987
No 6
>d1j5ua_ d.208.1.1 (A:) Hypothetical protein TM1083 {Thermotoga maritima [TaxId: 2336]}
Probab=2.04 E-value=2.1e+02 Score=9.97 Aligned_cols=15 Identities=7% Similarity=0.007 Sum_probs=10.1
Q ss_pred HHHHHHHHHCCHHHH
Q ss_conf 999999982461242
Q 537021.9.peg.1 29 LATLLYLFSSNFFLS 43 (47)
Q Consensus 29 latllylfssnffls 43 (47)
|.-++|+++..|+..
T Consensus 64 L~Ell~l~~~~~~~~ 78 (127)
T d1j5ua_ 64 VNDWILEISKGWAPW 78 (127)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHCCCEEEE
T ss_conf 999999866681889
No 7
>d1jb0f_ f.23.16.1 (F:) Subunit III of photosystem I reaction centre, PsaF {Synechococcus elongatus [TaxId: 32046]}
Probab=2.01 E-value=2.1e+02 Score=9.93 Aligned_cols=19 Identities=32% Similarity=0.642 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999988778999
Q 537021.9.peg.1 9 FLIFLYFAKYLRESTRAFF 27 (47)
Q Consensus 9 fliflyfakylrestraff 27 (47)
-++|||.|-+.-=+-|.+.
T Consensus 67 g~lFLYIAGwIGWaGR~YL 85 (141)
T d1jb0f_ 67 SVLFLYIAGWIGWVGRAYL 85 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 7999998421324429999
No 8
>d1p2za2 b.121.2.2 (A:651-962) Adenovirus hexon {Human adenovirus type 2 [TaxId: 10515]}
Probab=1.97 E-value=1.9e+02 Score=10.23 Aligned_cols=6 Identities=83% Similarity=1.320 Sum_probs=0.0
Q ss_pred HHCCHH
Q ss_conf 824612
Q 537021.9.peg.1 36 FSSNFF 41 (47)
Q Consensus 36 fssnff 41 (47)
|||||.
T Consensus 240 FSSnFm 245 (312)
T d1p2za2 240 FSSNFM 245 (312)
T ss_dssp CSTTSC
T ss_pred CCCCCC
T ss_conf 341325
No 9
>d2hkua2 a.121.1.1 (A:88-208) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=1.90 E-value=2.3e+02 Score=9.79 Aligned_cols=12 Identities=25% Similarity=0.506 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHH
Q ss_conf 988778999999
Q 537021.9.peg.1 19 LRESTRAFFSLA 30 (47)
Q Consensus 19 lrestraffsla 30 (47)
+.+++|+|+|-+
T Consensus 72 idVEsr~FWSaa 83 (121)
T d2hkua2 72 IDVESKAFWSAI 83 (121)
T ss_dssp HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
T ss_conf 767999999999
No 10
>d2je8a2 b.1.4.1 (A:784-864) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=1.90 E-value=1.9e+02 Score=10.24 Aligned_cols=6 Identities=67% Similarity=1.420 Sum_probs=0.0
Q ss_pred HHCCHH
Q ss_conf 824612
Q 537021.9.peg.1 36 FSSNFF 41 (47)
Q Consensus 36 fssnff 41 (47)
||.|+|
T Consensus 41 fSDN~F 46 (81)
T d2je8a2 41 YSDNFF 46 (81)
T ss_dssp ESCCSE
T ss_pred EECCEE
T ss_conf 806768
Done!