RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.15_1 (47 letters) >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 23.7 bits (51), Expect = 9.0 Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 8/37 (21%) Query: 15 FAKYLRESTRAFF------SLATLLYLFSSNFFLSDR 45 F K L E T F + A L+ F ++S Sbjct: 37 FNKILPEPTEGFAADDEPTTPAELVGKFLG--YVSSL 71 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.343 0.153 0.453 Gapped Lambda K H 0.267 0.0582 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 377,536 Number of extensions: 10143 Number of successful extensions: 28 Number of sequences better than 10.0: 1 Number of HSP's gapped: 28 Number of HSP's successfully gapped: 1 Length of query: 47 Length of database: 5,693,230 Length adjustment: 20 Effective length of query: 27 Effective length of database: 5,208,350 Effective search space: 140625450 Effective search space used: 140625450 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (22.0 bits) S2: 50 (23.4 bits)