Query         537021.9.peg.166_1
Match_columns 38
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 13730
Date          Tue May 24 15:58:25 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_166.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1lvaa4 a.4.5.35 (A:575-634) C  16.5      33  0.0024   14.9   1.9   15   16-30     33-47  (60)
  2 d2axtl1 f.23.31.1 (L:1-37) Pho  14.3      45  0.0033   14.3   2.2   15    3-17     22-36  (37)
  3 d1ldda_ a.4.5.34 (A:) Anaphase  11.4      19  0.0014   16.1  -0.5   30    1-30     30-59  (74)
  4 d1d8ja_ a.4.5.18 (A:) The cent  10.0      46  0.0034   14.2   1.1   11   25-35     34-44  (81)
  5 d2gnoa1 a.80.1.1 (A:209-306) g   7.9      66  0.0048   13.4   1.2   12   22-33     66-77  (98)
  6 d2p06a1 a.204.1.3 (A:1-84) Hyp   5.2 1.1E+02  0.0078   12.5   1.0   10   24-33     63-72  (84)
  7 d2o35a1 a.293.1.1 (A:2-80) Hyp   4.1 1.1E+02  0.0081   12.4   0.4   20   19-38     17-40  (79)
  8 d1smba_ d.111.1.1 (A:) Golgi-a   3.9 1.4E+02   0.011   11.8   1.5   13   23-35      5-17  (149)
  9 d1si2a_ b.34.14.1 (A:) Eukaryo   3.5 1.4E+02    0.01   11.9   0.5   13   20-32      4-16  (126)
 10 d1puee_ a.4.5.21 (E:) Transcri   3.4 1.4E+02  0.0099   12.0   0.4   16   19-34      2-17  (88)

No 1  
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=16.46  E-value=33  Score=14.91  Aligned_cols=15  Identities=33%  Similarity=0.822  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             699999999999995
Q 537021.9.peg.1   16 FFIIPLLQFLDEILD   30 (38)
Q Consensus        16 ffiipllqfldeild   30 (38)
                      -+.||+|.|+|..-.
T Consensus        33 K~ai~lLE~~D~~~~   47 (60)
T d1lvaa4          33 KYVLPLLEYLDQVKF   47 (60)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCCC
T ss_conf             899999999864498


No 2  
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=14.27  E-value=45  Score=14.25  Aligned_cols=15  Identities=40%  Similarity=0.842  Sum_probs=12.0

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             899999999711269
Q 537021.9.peg.1    3 LRMFMLQIIFSKEFF   17 (38)
Q Consensus         3 lrmfmlqiifskeff   17 (38)
                      |-.|.+.+.||.-||
T Consensus        22 Llifvl~vLFssYfF   36 (37)
T d2axtl1          22 LLILVLALLFSSYFF   36 (37)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999998704


No 3  
>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.43  E-value=19  Score=16.08  Aligned_cols=30  Identities=13%  Similarity=0.154  Sum_probs=14.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             948999999997112699999999999995
Q 537021.9.peg.1    1 MMLRMFMLQIIFSKEFFIIPLLQFLDEILD   30 (38)
Q Consensus         1 mmlrmfmlqiifskeffiipllqfldeild   30 (38)
                      +|||||..+---.-+.-.--|-.||++..+
T Consensus        30 ~mLkmfv~~~~~~~~~t~~eL~~FL~~~V~   59 (74)
T d1ldda_          30 SFLKITVPKDWGYNRITLQQLEGYLNTLAD   59 (74)
T ss_dssp             HHHHHHSCGGGCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             999987579999787699999999999986


No 4  
>d1d8ja_ a.4.5.18 (A:) The central core domain of TFIIE beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.97  E-value=46  Score=14.20  Aligned_cols=11  Identities=55%  Similarity=0.821  Sum_probs=7.8

Q ss_pred             HHHHHHHHHHC
Q ss_conf             99999533420
Q 537021.9.peg.1   25 LDEILDVKNNF   35 (38)
Q Consensus        25 ldeildvknnf   35 (38)
                      ||||||--|..
T Consensus        34 LeEiLDEt~~~   44 (81)
T d1d8ja_          34 LDEILDETQHL   44 (81)
T ss_dssp             HHHHHHHHTCS
T ss_pred             HHHHHHHHHHC
T ss_conf             99999888634


No 5  
>d2gnoa1 a.80.1.1 (A:209-306) gamma subunit {Thermotoga maritima [TaxId: 2336]}
Probab=7.93  E-value=66  Score=13.45  Aligned_cols=12  Identities=58%  Similarity=0.816  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999995334
Q 537021.9.peg.1   22 LQFLDEILDVKN   33 (38)
Q Consensus        22 lqfldeildvkn   33 (38)
                      ..|||.||.||.
T Consensus        66 vsfldsilrvk~   77 (98)
T d2gnoa1          66 VSFLDSILRVKI   77 (98)
T ss_dssp             HHHHHHHHTCCG
T ss_pred             HHHHHHHHHHHH
T ss_conf             389998899986


No 6  
>d2p06a1 a.204.1.3 (A:1-84) Hypothetical protein AF0060 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=5.17  E-value=1.1e+02  Score=12.45  Aligned_cols=10  Identities=60%  Similarity=0.880  Sum_probs=6.4

Q ss_pred             HHHHHHHHHH
Q ss_conf             9999995334
Q 537021.9.peg.1   24 FLDEILDVKN   33 (38)
Q Consensus        24 fldeildvkn   33 (38)
                      .-||.|||.|
T Consensus        63 lrdelldvan   72 (84)
T d2p06a1          63 LRDELLDVAN   72 (84)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999999


No 7  
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=4.06  E-value=1.1e+02  Score=12.37  Aligned_cols=20  Identities=50%  Similarity=0.707  Sum_probs=13.8

Q ss_pred             HHHHHHHHHHHHHHH----HCCCC
Q ss_conf             999999999995334----20689
Q 537021.9.peg.1   19 IPLLQFLDEILDVKN----NFGGF   38 (38)
Q Consensus        19 ipllqfldeildvkn----nfggf   38 (38)
                      -.|++.|++--||.|    |..||
T Consensus        17 rrL~~HL~~r~dVQNIDLMnLaGF   40 (79)
T d2o35a1          17 RRLLEHLRERSDVQNIDLMNLAGF   40 (79)
T ss_dssp             HHHHHHHHHTTTSCHHHHHHHHSC
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             999999873764203699999999


No 8  
>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.89  E-value=1.4e+02  Score=11.82  Aligned_cols=13  Identities=38%  Similarity=0.813  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHC
Q ss_conf             9999999533420
Q 537021.9.peg.1   23 QFLDEILDVKNNF   35 (38)
Q Consensus        23 qfldeildvknnf   35 (38)
                      ||-++|||..|.+
T Consensus         5 ~f~~~il~~HN~~   17 (149)
T d1smba_           5 QFHNEVLKAHNEY   17 (149)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999999


No 9  
>d1si2a_ b.34.14.1 (A:) Eukaryotic translation initiation factor 2C 1, EIF2C1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.49  E-value=1.4e+02  Score=11.91  Aligned_cols=13  Identities=38%  Similarity=1.068  Sum_probs=8.7

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999533
Q 537021.9.peg.1   20 PLLQFLDEILDVK   32 (38)
Q Consensus        20 pllqfldeildvk   32 (38)
                      |++.|+-|+++..
T Consensus         4 pvidf~~~~~~~~   16 (126)
T d1si2a_           4 PVIEFMCEVLDIR   16 (126)
T ss_dssp             EHHHHHHHHHTCS
T ss_pred             CHHHHHHHHHCCC
T ss_conf             6899999985513


No 10 
>d1puee_ a.4.5.21 (E:) Transcription factor PU.1, residues 171-259 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=3.36  E-value=1.4e+02  Score=11.95  Aligned_cols=16  Identities=38%  Similarity=0.499  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999953342
Q 537021.9.peg.1   19 IPLLQFLDEILDVKNN   34 (38)
Q Consensus        19 ipllqfldeildvknn   34 (38)
                      |-|.|||-+.|+-..+
T Consensus         2 i~LwqFL~~LL~d~~~   17 (88)
T d1puee_           2 IRLYQFLLDLLRSGDM   17 (88)
T ss_dssp             CCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHHHHCCCCC
T ss_conf             3599999999759457


Done!